Gene Information

Name : ECS88_2091 (ECS88_2091)
Accession : YP_002391788.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 2067954 - 2068865 bp
Length : 912 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
GTGCGCGGGGTTTTGTCTTTTTTCACCGGGAATACATGTATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCT
CTCCTCCCTGCCTTACTCACTTTCCCGTCACATCCTGGAACATCTGCGCAAACTCACCAGTCACGAACCCGTGCCTGGCA
TTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTAATGCGCTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTT
CACGCCGGCCCCCGGGAAGTGCAGCGCTTCCGTCTGAATGGCCATGGTCACAGCATGGTTATCACTGACCTGCCCGGGGT
GGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCTGTACCGTGACATTCTGCTCGAACTGGACCTGGTACTGTGGC
TGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGTATTTCTGGCGACACATCCTGCACCGGGGACATCAGCGGGTA
CTGTTTGTGGTGATGCAGGCCGATAAAACGGAGCCCTGCCATGAATGGGATATGGCCGGTATTCAGCCTTCTCCCGCACA
GGCACAGAACATTCGCGAAAAAACGGAGGCGGTATTCCGTCTGTTCCGGCCCGTACATCGGGTTGTTGCCGTATCGGCCC
GCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCACTTCCCGACCATGCCGCCAGTCCCCTGATGACC
CGCCTGCAGGACGAGCTGCGCACGGAGTCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATT
TGACACGGCGGAGAGCGTCTGCATTGCCTCTGTTGCACGCACGGTTCTGCGCGCCGTCCGTGACTCGGTGGTCTCTGTTG
CCCGCGCGGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MRGVLSFFTGNTCMNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVPGIMGKSGAGKSSLCNALFQGEVTPVSDV
HAGPREVQRFRLNGHGHSMVITDLPGVGESRDRDAEYEALYRDILLELDLVLWLIKADDRALSVDEYFWRHILHRGHQRV
LFVVMQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHRVVAVSARTGWELDTLVSALMTALPDHAASPLMT
RLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDSVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-122 99
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 4e-119 98
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 4e-119 98
unnamed AAL08471.1 unknown Not tested SRL Protein 3e-112 97
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 4e-112 97
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-117 97
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 3e-110 96
unnamed AAL99256.1 unknown Not tested LEE Protein 7e-110 96
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 1e-111 96
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 3e-109 95
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 1e-109 95
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 8e-110 95
Z1210 NP_286745.1 histone Not tested TAI Protein 3e-109 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_2091 YP_002391788.1 hypothetical protein VFG1062 Protein 1e-112 97
ECS88_2091 YP_002391788.1 hypothetical protein VFG1674 Protein 8e-112 96
ECS88_2091 YP_002391788.1 hypothetical protein VFG0654 Protein 4e-110 95