Gene Information

Name : ybgP (ECIAI1_0691)
Accession : YP_002386157.1
Strain : Escherichia coli IAI1
Genome accession: NC_011741
Putative virulence/resistance : Virulence
Product : putative exported chaperone, PapD family
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 749269 - 750024 bp
Length : 756 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10049807; Product type pf : putative factor

DNA sequence :
TTGTCATTAATTAAGGAAATGAAAATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCA
CGCTGCACTACAACCCGATCGCACTCGTATTGTGTTTAACGCTAATGATAAAGCTACCAGTCTGCGGGTGGATAATCGTA
GCGATAAACTCCCCTACCTCGCTTATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGATGATCTTCTGGTCGCCCTG
CCGCCGATACAACGTCTGGAACCGAAAGCAACAACGCAGGTACGGATAGTAAAGCAAGCCTCGACCACAAAATTACCGGG
CGATCGCGAAACGCTATTTTTCTACAATATGCGTGAAATTCCTCCCGCCCCGGAAAAAAACAGCGACCATGCCGTTCTGC
AAGTCGCCATTCAGAGTCGTATCAAGGTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTG
CAGTTACAGGTCAGCCAGCAGGGCAACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTACCTGGG
ACGAAATGAAAAAGGCGTTCTCCCCGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACGGTCAACACAAACACCGGAA
ATTATAGCGGCAGCCAGTTTTATCTCGGTTATATGGATGATTACGGCGCGTTACGCATGACGACGCTCAACTGCAGCGGA
CAATGCCATTTACAAGCCGTGGAGGCGAAGAAATGA

Protein sequence :
MSLIKEMKMTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVAL
PPIQRLEPKATTQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVEL
QLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMDDYGALRMTTLNCSG
QCHLQAVEAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-33 42
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 4e-38 42
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 5e-38 42
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 5e-38 42
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 7e-38 42
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 6e-38 42
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 6e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgP YP_002386157.1 putative exported chaperone, PapD family VFG0885 Protein 1e-33 42
ybgP YP_002386157.1 putative exported chaperone, PapD family VFG1547 Protein 2e-38 42
ybgP YP_002386157.1 putative exported chaperone, PapD family VFG0896 Protein 3e-38 42