Gene Information

Name : alpA (ECIAI1_4501)
Accession : YP_002389731.1
Strain : Escherichia coli IAI1
Genome accession: NC_011741
Putative virulence/resistance : Virulence
Product : putative phage DNA binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 4580526 - 4580732 bp
Length : 207 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin

DNA sequence :
ATGAATACAACCAATCAAAGCTTAATTCGTTTACCAGAAGTCTTGAAACGAACTGGTTTCGGCAAAGCCTGGATCTATCG
TCTGATCAGTGAAGGTCGGTTTCCGGCACCAGTGAAAATAGGTGTTCGTGCCGTTGCTTTTGTCGAGAGTGAAGTTGACG
AGTGGATTCAATCAGTTATTGAAACAAGTCGAAATAATGTTGCTTAG

Protein sequence :
MNTTNQSLIRLPEVLKRTGFGKAWIYRLISEGRFPAPVKIGVRAVAFVESEVDEWIQSVIETSRNNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 1e-09 49
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 6e-06 48
unnamed CAA21398.1 - Not tested HPI Protein 8e-06 48
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 47
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 47
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 46
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 4e-07 46
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 4e-07 46
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-06 45
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 7e-08 44
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 1e-05 43
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 1e-05 43
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 8e-05 42
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 9e-08 42
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alpA YP_002389731.1 putative phage DNA binding protein VFG1141 Protein 7e-10 47
alpA YP_002389731.1 putative phage DNA binding protein VFG1118 Protein 1e-07 46
alpA YP_002389731.1 putative phage DNA binding protein VFG1480 Protein 4e-08 42