Gene Information

Name : lpfB (ECIAI1_3710)
Accession : YP_002389018.1
Strain : Escherichia coli IAI1
Genome accession: NC_011741
Putative virulence/resistance : Virulence
Product : Chaperone protein lpfB
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3780211 - 3780897 bp
Length : 687 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14977923; Product type m : membrane component

DNA sequence : 
ATGAAACGTATTAGCTTTGCTGTGCTGGCACTTTTAATGACCGCACAACAGTGTTTTGCTGGTGGCGTAGCCTTAAGCAC
GACGCGTGTTATTTATGATGGCGGCAAGAAAGAAGCGTCGCTGACCGTTGAAAACCATAATAAAAATGAAGAGTTTTTGA
TCCAGTCATGGATTGATGATGTGAATAGCAATAAAAAAACACCGTTTATTATTACACCGCCATTATTCAAACTTGATCCT
GATAAAAATAACGTCTTACGTATCGTCAATATTGAAGATACCTTACCTAAAGATCGTGAATCCGTTTACTGGATTAATGT
AAAGGCCATTCCTGCGAAAAGTGCTGAAAATGAAAATAAAAACGTCTTACAGATAGCCGTTCGCACCCGTTTGAAGTTGT
TCTATCGTCCAAAAGGTTTGCCGGGAAGCAACCTCGAGGCCATGAAACAGTTACGTTTCCAGCGTCAAAATAACCAAATT
GTGGTTAATAACGACTCCGCTTATAACCTGACCTTTAATCAGTTTTCCATTAATGGACAAAAGATTGAACGGGCGGGAAT
GGTTCTCGCGAAAGGAAAGTTAAACATTAACCTTCCAGCCGGTACAGGCAACGCGCACGAAGTGAAATACAGCATTATTA
ATGATTTCGGTGTTGCTGGCGAAATGCTGACGAAGCCGATTAACTGA

Protein sequence : 
MKRISFAVLALLMTAQQCFAGGVALSTTRVIYDGGKKEASLTVENHNKNEEFLIQSWIDDVNSNKKTPFIITPPLFKLDP
DKNNVLRIVNIEDTLPKDRESVYWINVKAIPAKSAENENKNVLQIAVRTRLKLFYRPKGLPGSNLEAMKQLRFQRQNNQI
VVNNDSAYNLTFNQFSINGQKIERAGMVLAKGKLNINLPAGTGNAHEVKYSIINDFGVAGEMLTKPIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpfB YP_002389018.1 Chaperone protein lpfB VFG0455 Protein 1e-73 70
lpfB YP_002389018.1 Chaperone protein lpfB VFG0445 Protein 7e-42 42
lpfB YP_002389018.1 Chaperone protein lpfB VFG0911 Protein 5e-39 41
lpfB YP_002389018.1 Chaperone protein lpfB VFG1644 Protein 6e-39 41