Gene Information

Name : garL (ECIAI1_3274)
Accession : YP_002388609.1
Strain : Escherichia coli IAI1
Genome accession: NC_011741
Putative virulence/resistance : Unknown
Product : alpha-dehydro-beta-deoxy-D-glucarate aldolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3836
EC number : 4.1.2.20
Position : 3359029 - 3359799 bp
Length : 771 bp
Strand : -
Note : cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate

DNA sequence :
ATGAATAACGATGTTTTCCCGAATAAATTCAAAGCCGCACTGGCTGCGAAACAGGTACAAATTGGTTGCTGGTCAGCACT
CTCTAACCCGATTAGCACTGAAGTTCTTGGTTTGGCTGGGTTTGACTGGCTGGTGCTGGATGGCGAACATGCGCCAAACG
ATATCTCCACGTTTATTCCGCAGTTAATGGCCCTGAAAGGCAGCGCCAGCGCGCCAGTAGTGCGAGTGCCGACCAACGAG
CCGGTAATTATTAAGCGTCTTCTGGATATCGGTTTCTATAACTTCCTGATTCCTTTTGTAGAAACAAAAGAGGAAGCAGA
GCAGGCGGTGGCATCAACCCGTTACCCACCGGAAGGCATTCGCGGCGTCTCCGTTTCTCACCGCGCCAATATGTTTGGCA
CCGTGGCGGATTATTTCGCTCAGTCGAACAAGAACATCACCATTCTGGTCCAGATAGAAAGTCAGCAGGGCGTAGATAAC
GTCGATGCCATTGCCGCTACCGAAGGTGTAGACGGTATCTTCGTCGGCCCCAGCGATCTGGCTGCGGCATTAGGCCATCT
CGGCAATGCCTCGCACCCGGATGTACAAAAAGCAATTCAGCACATTTTTAACCGTGCCAGTGCGCACGGCAAACCCAGCG
GTATTCTCGCGCCGGTCGAAGCCGATGCGCGTCGTTATCTGGAATGGGGCGCGACGTTTGTGGCTGTCGGCAGCGATCTT
GGCGTCTTCCGCTCTGCCACTCAGAAACTGGCTGATACCTTTAAAAAATAA

Protein sequence :
MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNE
PVIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN
VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDL
GVFRSATQKLADTFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaI AAO17185.1 HpaI Not tested tcd island Protein 2e-49 47