|
Name : yghJ (ECIAI1_3114) Accession : YP_002388453.1 Strain : Escherichia coli IAI1 Genome accession: NC_011741 Putative virulence/resistance : Virulence Product : inner membrane lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 3192399 - 3196976 bp Length : 4578 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1644747; Product type lp : lipoprotein DNA sequence : ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGG TGGTTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC CAAACCCGGAGCCGACGCCTGAGCCGACGCCTGAGCCAACGCCGGAGCCTGAACCTACGCCGGAACCGACACCTGATCCT GAGCCAACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCTGCGGGTAAC TGGTGATATCACCTGTAATGATGAATCCAGCGATGGCTTTACCTTTACACCAGGCGACAAAGTCACCTGTGTGGCAGGGA ACAACACGACAATTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGT CTTGAGGACGCGCAAGAACTGGCGGGTTCCGACAACAAGAAAAGCAATGCGCTCTCGCTGGTCACCTCCATGAACAGTTG CCCGGCGAATACAGAACAGGTGTGCCTGGAGTTCTCCTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAA TCGATCTGGCACCGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCGCCATCC ACTCATACTTCACCGGTCGTGCCCGCCACCACTCCGGGAACAAAACCGGATCTAAACGCTTCCTTCGTGTCGGCTAACGC GGAACAGTTTTATCAGTATCAACCTTCGGAAATCATTCTCTCAGAAGGTCGCCTGGTCGATAGTCAGGGGGATGGTGTTG TTGGTGTCAACTATTACACCAATTCCGGCCGTGGTGTAACCGGAGAAAACGGGGAATTTTCCTTTAGTTGGGGGGAAACC ATCTCCTTTGGCATCGACACTTTTGAGCTTGGTTCTGTGCGTGGTAACAAGTCGACTATTGCATTGACTGAACTGGGTGA TGAAGTTCGCGGGGCAAATATCGATCAGTTGATTCACCGCTATTCGAAGGCTGGACAAAATCACACGCGTGTAGTTCCGG ATGAAGTACGCAAGGTTTTTGCTGAATATCCCAACGTGATTAACGAGATTATCAATCTCTCGTTATCCAATGGTGCGACG CTGGGGGAAGGTGAGCAAGTCGTTAATCTGCCTAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCAAAGAGATCGA TACCGCGATTTGTGCGAAAAACGACGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCGCAATGTTAATGACGGCC AGATTCAGGGCGTTATTAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGCAAGTTCCATGTATTCCATGAC TCTACTAACTTCTATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCT GATGGCGCGTAATGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAACGAGCTGGCGTACATTA CGGAAGCGCCTTCTCTTGTTGAGCCGGAAAACGTTACGCGCGATACCGCCACCTTTAACCTGCCGTTTATTTCGCTGGGG CAAGTGGGCGATGGCAAGCTGATGGTTATCGGTAACCCACACTACAACAGCATCCTGCGTTGCCCGAACGGTTACAGCTG GAACGGGGGCGTTAATAAAGATGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGC TGCGCTATCTGTCAAATGATCGCTGGTTGCCGGATGCAAAATCCAGTATGACCGTGGGTACTAACCTGGAGACGGTGTAT TTCAAAAAACATGGGCAGGTGCTGGGAAATAGCGCACCGTTTGCGTTCCACAAGGATTTCACTGGCATCACGGTCAAACC GATGACCAGCTATGGCAATCTGAATCCAGATGAAGTTCCTCTGTTGATCCTCAATGGCTTTGAATACGTCACACAATGGG GTAGCGATCCTTACTCCATTCCTCTGCGCGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGACCGATTTGATC GCCTATATGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCATCTGGCTT TGTACGTCTGCTTGATGCCGCAGGTTTGTCGATGGCGCTTAACAAGTCGGTAGTAAATAACGACCCGCAAGGCTACCCGG ACCGCGTTCGTCAACGACGTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTGTCGATGGTAAACCACCGTATACC ATTGATGACACCACGAAAGAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGC CAGCTGGCAGGAAGAAGTTGAGGGTAAACAGGTAACCCAATTCGCCTTTATTGATGAAGCCGACCACAAAACGCCTGAGT CACTGGCTGCGGCAAAACAGAGAATTCTGGACGCGTTCCCAGGGCTGGAAGTGTGTAAGGATTCTGACTACCACTATGAG GTCAACTGTCTGGAATACCGCCCAGGCACGGATGTGCCGGTAACCGGTGGCATGTATGTTCCGCAGTATACGCAGCTGGA TCTGAGTGCCGACACCGCGAAAGCGATGCTGCAGGCTGCGGATTTAGGCACCAATATTCAGCGCCTGTATCAGCATGAGC TTTATTTCCGTACCAATGGCCGCCAGGGTGAGCGTCTCAACAGCGTTGATCTGGAACGTTTATACCAAAACATGTCCGTC TGGCTGTGGAACGAGACGAAATATCGTTATGAAGAGGGTAAAGAAGACGAGCTGGGCTTTAAAACGTTCACTGAGTTTCT GAACTGCTACACCAACAATGCATACGTTGGCACGCAGTGTTCTGCTGAGCTGAAAAAATCGCTGATCGATAACAAGATGA TTTATGGTGAAGAAAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGC CTGATGCTGGGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTTGAGAAGTATCCGGGAGTGGTGAATACAAACGG CGAAACCGTCACACAAAACATTAACTTGTACTCAGCTCCAACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGT GGGCACCTGCCCAGCAGGAAGTCAGCATTGAGTCAAAGGCGACAGTTCCTGTGACCGTGACTGTTGCGCTGGCCGACGAC CTGACAGGACGAGAGAAGCATGAAGTTAGCCTGAATCGTCCACCCAGAGTGACAAAAACCTATGACCTGAAAGCCAATGA TAAGGTGACGTTCAAAGTCCCTTACGGTGGTCTGATTTACATCAAGGGCGACAGCAAAGAGGTGCAATCAGCTGACTTCA CCTTTACCGGTGTAGTAAAAGCGCCGTTCTATAAAGACGGTAAGTGGCAACACGATCTGAACTCCCCTGCCCCGCTGGGC GAACTGGAGTCTGCCTCGTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACTGGAGCA ATTCGCTAACGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGCCGTGATAGCGAAGACGGTAAGCACCGGA TGTTTACCTATAAAAACTTGCCGGGCCACAAACATCGTTTCGCCAACGATGTGCAGATCTCCATCGGTGATGCGCATTCG GGTTATCCGGTAATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTG GCATGAAGTCGGTCATAACGCCGCAGAAACGCCGTTGACTGTACCGGGTGCAACTGAAGTCGCTAACAACGTGCTGGCGC TGTACATGCAGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAA AGCAACGGTCAGGCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGCTGAAGGAATGGGCAGAGAA AAACTTTGATATCAAGAAATGGTATCCAGATGGCACTCCTCTGCCAGAGTTTTACAGCGAGCGTGAAGGGATGAAAGGCT GGAACCTGTTCCAGTTGATGCATCGTAAAGCATGCGGCGATGAGGTCAGCAATGACAAGTTTGGCGGCAAGAATTACTGT GCTGAATCCAACGGTAACGCAGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTT TAAGAAATGGAATCCGGGCGCGAATGCTTACCAGTTGCCGGGAGCGACGGAGATGAGCTTCGAAGGCGGTGTGAGCCAGT CGGCGTACAACACGCTGGCGTCACTCAATCTGCCGAAACCGAAGCAAGGGCCGGAAACCATTAACAAGGTTACCGAGTAT TCGATGCCTGCTGAATAA Protein sequence : MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPEPTPEPEPTPEPTPDP EPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFS LEDAQELAGSDNKKSNALSLVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPS THTSPVVPATTPGTKPDLNASFVSANAEQFYQYQPSEIILSEGRLVDSQGDGVVGVNYYTNSGRGVTGENGEFSFSWGET ISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSKAGQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGAT LGEGEQVVNLPNEFIEQFKTGQAKEIDTAICAKNDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHD STNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLG QVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLETVY FKKHGQVLGNSAPFAFHKDFTGITVKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTDLI AYMNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYT IDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKQRILDAFPGLEVCKDSDYHYE VNCLEYRPGTDVPVTGGMYVPQYTQLDLSADTAKAMLQAADLGTNIQRLYQHELYFRTNGRQGERLNSVDLERLYQNMSV WLWNETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKAGMMNPSYPLNYMEKPLTR LMLGRSWWDLNIKVDVEKYPGVVNTNGETVTQNINLYSAPTKWFAGNMQSTGLWAPAQQEVSIESKATVPVTVTVALADD LTGREKHEVSLNRPPRVTKTYDLKANDKVTFKVPYGGLIYIKGDSKEVQSADFTFTGVVKAPFYKDGKWQHDLNSPAPLG ELESASFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRFANDVQISIGDAHS GYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEE SNGQAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKACGDEVSNDKFGGKNYC AESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLNLPKPKQGPETINKVTEY SMPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 87 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_002388453.1 | inner membrane lipoprotein | VFG0106 | Protein | 0.0 | 49 |
