Gene Information

Name : insF (ECIAI1_2060)
Accession : YP_002387468.1
Strain : Escherichia coli IAI1
Genome accession: NC_011741
Putative virulence/resistance : Unknown
Product : IS3 element protein InsF
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2113270 - 2114136 bp
Length : 867 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; Product type h : extrachromosomal origin

DNA sequence :
ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCGG
CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCC
TCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTT
AACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTA
CCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAG
GAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATT
GGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCC
CCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATC
TGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAA
TGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTATTTAATTATATCGAATGTGATTACAATCG
GTGGCGGCGGCACAGTTGGTGTGGTGGCCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAG

Protein sequence :
MKYVFIEKHQAEFSIKAMCRVLRVARGGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPF
NVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVE
CIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENQNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-133 99
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 8e-134 99
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-132 99
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 3e-113 86
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-44 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-44 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-44 43
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-44 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-44 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-44 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-44 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 3e-44 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 3e-44 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 3e-44 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 8e-45 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insF YP_002387468.1 IS3 element protein InsF VFG1631 Protein 1e-113 86
insF YP_002387468.1 IS3 element protein InsF VFG1706 Protein 1e-44 42