Gene Information

Name : EFER_0865 (EFER_0865)
Accession : YP_002382038.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : transcriptional regulator with PLP domain
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 879387 - 880406 bp
Length : 1020 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 15223311, 99061204; Product type pr : regulator

DNA sequence :
ATGGCAATAACCCGAAAACGTCGTAGTACAGGAAAGGTCACCATCGCCGATGTTGCGCAACTGGCTGGTGTCGGAACCAT
GACCGTATCCAGGGCGTTACGTACGCCTGAGCAAGTTTCCGATAAGCTGCGGGAGAAAATTGAAGCCGCTGTGCATGAGC
TGGGCTATATGCCCAATCTCACCGCAAGTGCACTGGCATCGGCTTCTTCACATACTATTGCGATGGTCGTTCCAAATCTG
GCTGAAGCGGGATGTTCAGAAATGTTTGCCGGACTCCAGCAAGCGCTGCAGCCTGCGGGATACCAGATCATGTTGGCAGA
ATCTCGTCACCGGTTAGATCAAGAAGAGAAACTACTGGAAACACTTCTCGCATCCAATATTGCAGCCGCTATTTTGCTTA
GTGTCGAACATAGTGACACTGTGCGTAACTGGCTCAAAAATGCCTCAATTCCGGTGATGGAGATTGGCGCGATTCGTGCC
GATCCCATTGATATGAATATTGGGATTGATAACGTAGCAGCTATGTTCGAGCTGACCGATATGCTGGTGCAGCGTGGTTA
TCAGAATATTGGCCTGTTGTGTGCTAATCAGGAACAATGGATTTTCCAACAACATTTACAAGGATGGTATAAAGCCATGC
TGCGCCATCATATGTCTCCTGATCGCGTCATCAATGCTGCTTTGCCTCCTGTGTTTTCAACTGGCGCATCACAACTCCCT
GAATTTTTACTTGCATGGCCAGAACTCGATGCTCTGGTATGCGTGTCTGATGAGCTGGCTTGCGGTGTTCTTTATGAGTG
TCAAAGAAGGCGTATCAAAGTACCAGATGAACTCGCCGTGGTCGGATTTGGTGACAGTGATGTGAGTCGGGTATGCCAAC
CACCATTAACCACTATGGCCGTTCCACATCGCAAAATTGGTTTCGAAGCAGGAAGAGCACTTCTGGAAAGGATTAAAGAC
GGCAACTGGAGCGATCGTCAATTGATCGCTCCCAGTTTATGTTTGCGAGAAAGCTGCTGA

Protein sequence :
MAITRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLREKIEAAVHELGYMPNLTASALASASSHTIAMVVPNL
AEAGCSEMFAGLQQALQPAGYQIMLAESRHRLDQEEKLLETLLASNIAAAILLSVEHSDTVRNWLKNASIPVMEIGAIRA
DPIDMNIGIDNVAAMFELTDMLVQRGYQNIGLLCANQEQWIFQQHLQGWYKAMLRHHMSPDRVINAALPPVFSTGASQLP
EFLLAWPELDALVCVSDELACGVLYECQRRRIKVPDELAVVGFGDSDVSRVCQPPLTTMAVPHRKIGFEAGRALLERIKD
GNWSDRQLIAPSLCLRESC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39290.1 hypothetical protein Not tested LPA Protein 3e-52 43
vpeR ADD91728.1 putative transcriptional regulatory protein VpeR Virulence PAI-I AL862 Protein 2e-54 43