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Name : EFER_0826 (EFER_0826) Accession : YP_002381999.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : outer membrane usher protein yfcU Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 843083 - 845731 bp Length : 2649 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGGATACGTGTATGCCTGACCATTCTCTTTTCCGCTTACGGGCGCTTCCTTGGTGCGTTGCCGTGGCCATCTCTGGATG CCATATCAATGCCTGGGCTGATGAAGATATTCAGTTTGATTCCCGTTTTCTGGAATTAAAAGGCGACACGAAAATCGATT TAAAACGCTTTTCAAGCCAGGGTTATGTTGAGCCAGGTAAATACAGTTTACAGGTTGAGGTCAATAAACAGCCGTTACCC GGTGAATATGATATTTACTGGTATGCAACAGAAAATGACGCCAATAAGACTTATGCCTGTCTGTCGCCAGACCTGGCGGC ACAGCTTGGTTTTAAAGAAGACATTGCGAACAATTTGCAATGGGTTCTCGACGGTAAATGCCTCAAGCCAGGCCAACTTG ACGGTCTGGAAATGCGCGCTGATTTAAGCCAGTCCGCACTCCTTATCACCTTACCGCAGGCTTATCTTGAATACAGCGAT GTCGACTGGGACCCTCCCTCGCGCTGGGATGATGGCATCTCAGGTTTAATTGCCGATTACAGCATCAATGCCCAAACCCG ACATGAAGAAAATAGCGGTGATGACAGCAACGATATCAGCGGCAACGGTACGGTTGGCGTTAACCTCGGGCCGTGGCGCT TGCGAGCCGACTGGCAGAGCGATTATCAGCATACCCGCAGTAATGATAAAGAGACGGAAGACAGCACCGAAAGAAACTGG GACTGGAGCCGTTACTATGCCTGGCGCGCGTTACCGAGCCTGAAAGCCAAACTGGCACTCGGTGAAGATTACCTCGATTC CGATATTTTCGATGGCTTTAACTACATCGGCGGTAGTATCAGTACTGACGATCAAATGCTGCCGCCGAATCTGCGCGGCT ATGCTCCAGATATTTCCGGCGTGGCCCATACGGCGGCGAAAGTCACCGTTAGCCAGGCCGGGCGTATAATTTATGAAACC CAGGTGCCAGCCGGGCCATTCCGTATCCAGGATCTTGCCGATTTTAGCTCTGGTACGCTGCATGTGCGCATTGAAGAGGT GAACGGTCAGGTGCAGGAGTATGACATCAGCACTGCCTCCATGCCGTTCCTGACTCGCCCGGGCCAGGTGCGCTACAAAA TTATGATGGGGCGACCACAGGAGTGGGGGCACCATGTGCAAGGCGGGTTCTTTTCCGGTGGCGAAGCGTCCTGGGGGATA GCAAACGGCTGGTCACTGTATGGCGGGGCGCTTGGCGATGAAAATTACCAGTCAGCCGCGCTTGGGATTGGTCGCGATCT CTCCATTTTCGGTGCGATGGCCTTTGATATCACCCACTCGCATACCCGACTTGACGATTCGACCGCTTACGGAAAAAGCA CTCTCGACGGTAACTCTTTCAGAGTCAGTTATTCCAAAGACTTTGATGAACTCAACAGCCGCGTCACCTTCGCCGGATAC CGCTTCTCGGAAGAGAACTATATGACCATGAGTGAGTATCTGGACGCGAATGACAGCGCAATGGTCCGCTCAGGCAATGA TAAAGAGATGTACACCGCCACCTATAACCAGAACTTTAGAGATGCCGGTGTTTCTGTTTACCTGAACTATACGCGTCACA CCTACTGGGATCGTGAGGAACAGACCAACTACAACGTAATGCTCTCCCACTATTTCAATATGGGCGGCATTCGTAACATG AGTATCTCTCTGACCGGTTATCGCTATGAGTATGACAACAGCGCCGATAAAGGTGTCTATATCTCCTTAAGTATGCCGTG GGGTGATAGCAGTACGGTGAGTTACAACGGTAACTACGGTAGCGGTCCTGACAGCAGCCAGGTGGGGTATTTCAGCCGTA TAGACGACGCCAGTCATTATCAGATAAACGTTGGCAACAGTGAAAATCACTCCAGCGTGGATGGTTATTACAGCCGTGAC GGTTCAATGGCCCATGTGGACCTCAGTGCCAACTACCATGAAGGGCAGTACACCTCTGCCGGGTTGTCGCTACAGGGCGG CGCCACGCTCACAGCTCACGGTGGTGCGTTGCACCGAACTCAAAATATGGGCGGTACGCGATTACTGATTGACGCTGACG GTGTCGCCGACGTACCGGTCGAAGGGAATGGCGCAGCGGTTTATACCAATATGTTTGGCAAAGCCGTCGTTGCCGACGTC AATAACTACTACCGTAACCAGGCCACTATTGACCTGACCAGACTGCCAGATGACGCTGAAGCCACGCAGTCTGTAGTGCA GGCGACACTTACCGAAGGCGCCATTGGCTACCGTCAATTTGCGGTTATCAGTGGGCAAAAGGCGATGGCTGTCCTGCGCA TGAGTGATGGCAGTTACCCGCCATTTGGTGCGGAAGTGAGAAACGAACACGACCAGCAGGTCGGCCTGGTTGATGATGAC GGCAACGTCTATCTGGCTGGAGTAAAAGCGGGCGAACACATGTGTGTCTCATGGAATGGCGAACCCCACTGTGAGATCTC ACTGCCAGACCCGCTACCTGCCGACCTGTTCAATGGCCTGTTACTGCCGTGCAAGCAACAAGGCGCTGTGCTGCCTGCGG CTCCGGTAGAGATTAAACCGATGATTCAGGAACAAACGCAGCAGGTCACACCTGGCGCGGAACCCATGGCTATTTCAGCA AACCAATAA Protein sequence : MDTCMPDHSLFRLRALPWCVAVAISGCHINAWADEDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYSLQVEVNKQPLP GEYDIYWYATENDANKTYACLSPDLAAQLGFKEDIANNLQWVLDGKCLKPGQLDGLEMRADLSQSALLITLPQAYLEYSD VDWDPPSRWDDGISGLIADYSINAQTRHEENSGDDSNDISGNGTVGVNLGPWRLRADWQSDYQHTRSNDKETEDSTERNW DWSRYYAWRALPSLKAKLALGEDYLDSDIFDGFNYIGGSISTDDQMLPPNLRGYAPDISGVAHTAAKVTVSQAGRIIYET QVPAGPFRIQDLADFSSGTLHVRIEEVNGQVQEYDISTASMPFLTRPGQVRYKIMMGRPQEWGHHVQGGFFSGGEASWGI ANGWSLYGGALGDENYQSAALGIGRDLSIFGAMAFDITHSHTRLDDSTAYGKSTLDGNSFRVSYSKDFDELNSRVTFAGY RFSEENYMTMSEYLDANDSAMVRSGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNVMLSHYFNMGGIRNM SISLTGYRYEYDNSADKGVYISLSMPWGDSSTVSYNGNYGSGPDSSQVGYFSRIDDASHYQINVGNSENHSSVDGYYSRD GSMAHVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVADV NNYYRNQATIDLTRLPDDAEATQSVVQATLTEGAIGYRQFAVISGQKAMAVLRMSDGSYPPFGAEVRNEHDQQVGLVDDD GNVYLAGVKAGEHMCVSWNGEPHCEISLPDPLPADLFNGLLLPCKQQGAVLPAAPVEIKPMIQEQTQQVTPGAEPMAISA NQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 1e-153 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 5e-152 | 43 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 6e-152 | 43 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-153 | 43 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 1e-153 | 43 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-153 | 43 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 4e-159 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EFER_0826 | YP_002381999.1 | outer membrane usher protein yfcU | VFG1548 | Protein | 7e-154 | 43 |
| EFER_0826 | YP_002381999.1 | outer membrane usher protein yfcU | VFG0884 | Protein | 8e-154 | 43 |
| EFER_0826 | YP_002381999.1 | outer membrane usher protein yfcU | VFG0895 | Protein | 6e-154 | 43 |
