Gene Information

Name : yfdH (EFER_0628)
Accession : YP_002381813.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 629928 - 630860 bp
Length : 933 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 12878731, 13129938, 9689094; Product type h : extrachromosomal origin

DNA sequence :
ATGAAGATATCTCTTGTAGTTCCTGTCTTCAATGAAGAAGAAGCGATACCAATTTTTTATAAAACGGTACGTGAATTCGA
AGAATTGAAGCCATATGAGGTGGAAATTGTTTTCATAAATGACGGAAGCAAAGATGCCACGGAGTCAATTATTAACGATC
TGGCTATTTCAGACCCGCTAGTTGTTCCACTGTCATTTACACGCAACTTTGGTAAAGAACCAGCATTGTTTGCAGGGTTA
GACCATGCAACTGGTGATGCCGTGATACCTATTGATGTTGACCTGCAAGACCCGATTGAGGTTATCCCTCATCTTATTGA
AAAGTGGCAGGCAGGTGCTGATATGGTGCTGGCAAAACGATCTGACCGCTCCACTGACAGTCGATTAAAGCGCAAATCTG
CTGAGTGGTTCTACAAATTACACAACAAAATCAGTAACCCCAAAATTGAAGAGAACGTCGGTGATTTTCGCTTGATGTCC
CGTAATGTTGTAGAAAATATTAAGCTTATGCCTGAACGTAACCTATTTATGAAAGGCGTGCTTAGCTGGGTTGGTGGTAA
AACTGATGTTGTTGAGTATGCACGAGCAGAGAGAGTTGCTGGTAGCACTAAATTTAATGGCTGGAAGCTTTGGAACCTGG
CTTTAGAAGGTATTACGAGCTTTTCAACATTCCCTCTACGAATGTGGACATATATTGGACTACTTGTTGCTGGACTTTCT
TTTATTTACGGCGCATGGATGATCGCCGATAAATTACTATTTGGTAATAACGTTCCAGGTTATCCATCACTACTAGTTTC
AATACTTTTCCTAGGTGGCGTGCAACTAATTGGGATTGGCGTTCTTGGTGAGTATATCGGAAGAATTTACATCGAAAGCA
AAGGAAGACCGAGATATTTATTAAAGAAAGGTAGTGATTATGATGCTAAATAA

Protein sequence :
MKISLVVPVFNEEEAIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINDLAISDPLVVPLSFTRNFGKEPALFAGL
DHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDSRLKRKSAEWFYKLHNKISNPKIEENVGDFRLMS
RNVVENIKLMPERNLFMKGVLSWVGGKTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLLVAGLS
FIYGAWMIADKLLFGNNVPGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYIESKGRPRYLLKKGSDYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 8e-122 90
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 7e-119 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_002381813.1 bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage VFG0670 Protein 2e-121 90