Gene Information

Name : int (EFER_0450)
Accession : YP_002381651.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 458001 - 459200 bp
Length : 1200 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence : 
GTGTCACGTACAACACGCCCTCTTACTAACACTGAACTATCACGGGCTAAAGCAACTGCAAAGGATCTAACGCTACATGA
TGGTAATGGACTTTTTCTACTCGTAAAAACGAACGGTAGGAAGCTGTGGCGTTTCCGATACCAGAAACCAGTAACAAAAC
AACGAACCATGATTGGTTTAGGGTCTTTCCCTGCCCTTTCTCTGGCTGAAGCCAGAAACACTCGTGCTGAGTATCTTTCC
TTGCTGGCCCGAGGTATTGATCCACAGATATACAGTGAGCAAGTCACTGTACAGCAACAGATTGCGGAAGATAGTATTTT
TTCAAACGTTGCCTCAAAATGGTTTGCCATAAAAAGAAACAACGTAACACCTGATTACGCAAAGGATGTATGGCGCTCCT
TAGAGAGAGATATTTTCCCTACTATCGGTGAAATTCCTGTTCAGAAAATAAAAGCTCGTACATTAATTGAAACCTTAGAA
CCAATTAAAGCTCGTGGAGCACTTGAAACTGTTCGTCGTTTGGTACAACGTATTAATGAAATTATGATTTATGCCGTTAA
TACTGGCTTAATTGACGCTAATCCTGCATCAGGTATTGGTATGGCATTTGAGAAACCTAAAAAGAAAAACATGCCAACAC
TACGACCTGAAGAATTACCGAAACTTATGTATTCTTTATCTATGTCAAATCTTTCTGTGCAGACCCGTTGTCTGATTGAA
TGGCAACTACTCACCCTTGTGCGCCCTTCAGAGGCTTCAGGCACTCAATGGAAGGAGATCGATTTTGATGCAAAACTCTG
GAGAATTCCTGCTGAAAGGATGAAAGCTAAGCGCGAACATATTGTACCTTTATCACCTAAGGCTTTAGATATTCTTGAAG
TTATGAAAACTATTAGTGCTCATCGTGAGTATGTTTTCCCAAGTAGAAATGATCCACAAAAACCCATGAATAGCCAAACT
GCAAATGCCGCTTTAAAAAGGATAGGATATGGTGGAAAACTCGTTGCTCATGGTTTACGTTCTATTGCCAGCACTGCAAT
GAATGAAGCCGAATTTAACGCTGATGTAATAGAATCAGCCTTAGCTCATAGCGATAAGAATGAAGTCAGAAAAGCTTATA
ACCGTTCTACTTACTTAGAACAAAGGAAGAATTTAATGAACTGGTGGAGTTCTTTTGTTCATAAATCTTTATCCTTTTAA

Protein sequence : 
MSRTTRPLTNTELSRAKATAKDLTLHDGNGLFLLVKTNGRKLWRFRYQKPVTKQRTMIGLGSFPALSLAEARNTRAEYLS
LLARGIDPQIYSEQVTVQQQIAEDSIFSNVASKWFAIKRNNVTPDYAKDVWRSLERDIFPTIGEIPVQKIKARTLIETLE
PIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKKNMPTLRPEELPKLMYSLSMSNLSVQTRCLIE
WQLLTLVRPSEASGTQWKEIDFDAKLWRIPAERMKAKREHIVPLSPKALDILEVMKTISAHREYVFPSRNDPQKPMNSQT
ANAALKRIGYGGKLVAHGLRSIASTAMNEAEFNADVIESALAHSDKNEVRKAYNRSTYLEQRKNLMNWWSSFVHKSLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20803.1 integrase Not tested VPI Protein 3e-103 53
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-103 53
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 4e-103 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 4e-103 53
int AAK20773.1 integrase Not tested VPI Protein 3e-103 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 3e-105 51
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-86 47
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-86 47
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 3e-87 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
int YP_002381651.1 phage integrase VFG1092 Protein 4e-87 47