Gene Information

Name : basR (EFER_4172)
Accession : YP_002385183.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4278609 - 4279298 bp
Length : 690 bp
Strand : -
Note : response regulator in two-component regulatory system with BasS

DNA sequence : 
ATGCCGGAGAAACGCTCGATGAAAATCTTAATTGTTGAAGACGATACATTGTTACTACAGGGATTAATCCTTGCTGCGCA
AACCGAAGGTTATGCCTGCGACGGTGTTTCAACGGCTCGCGCTGCCGAGCAGTTTCTGGAGAGCGGGCATTACAGCCTGG
TTGTGCTCGATCTCGGCTTGCCCGACGAAGATGGCCTGCACTTTCTTGCTCGTATCCGGCAGAAAAAACACACTCTGCCA
GTTCTGATTCTGACTGCACGCGACACGCTCACTGACAAAATCGCCGGGCTGGATGTCGGTGCAGATGATTATCTGGTGAA
ACCCTTTGCGCTGGAGGAGCTACATGCCCGCATCCGCGCCTTGTTACGCCGACACAATACCCAGGGTGAAAGTGAACTCA
ATATTGGCAATCTTAAGCTGATTATGGGACGACGCCAGGTGTGGATGGGGAATGAAGAACTGATCCTGACGCCAAAAGAG
TACGCGCTGCTGTCGCGGTTAATGCTCAAAGCAGGTAGCCCTGTACACCGGGAAATTCTCTACAACGATATTTATAACTG
GGATAACGAGCCTTCCACCAACACGCTGGAAGTGCATATCCATAACCTGCGCGACAAAATCGGCAAGGAGCGAATCCGCA
CCGTGCGCGGTTTTGGCTATATGCTGGTTACCTCTGAGGAAGCTAAGTGA

Protein sequence : 
MPEKRSMKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEQFLESGHYSLVVLDLGLPDEDGLHFLARIRQKKHTLP
VLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHNTQGESELNIGNLKLIMGRRQVWMGNEELILTPKE
YALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKIGKERIRTVRGFGYMLVTSEEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_002385183.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 6e-55 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_002385183.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 3e-83 89