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Name : gabD (EFER_0411) Accession : YP_002381615.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 421595 - 423043 bp Length : 1449 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGAAACTGAACGACAGTAACTTATTCCGCCAGCAGGCGTTAATTAACGGGGAATGGCTGGACGCCAACAATGGCGAAGT CATCGAGGTCACCAATCCGGCGAATGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCAGATGAAACCCGCGCCGCTA TTGACGCCGCCAACCGCGCCCTACCCGCCTGGCGTGCCCTTACCGCCAAAGAACGCGCCAACATTCTGCGTAACTGGTTC AATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGCAAACCGCTGGCGGAAGCGAAAGG CGAAATCAGCTACGCCGCCTCATTTATTGAGTGGTTTGCCGAAGAAGGCAAACGCATTTATGGCGACACCATTCCCGGTC ATCAGGCCGATAAGCGCCTGATTGTCATCAAGCAGCCGATTGGTGTTACCGCCGCTATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGTAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACGATGGTGCTGAAGCCCGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCAGAGCTGGCGATTCGCGCGGGCATTCCGGCTGGCGTATTTAGCGTGGTGACCGGTTCGGCGG GCGCGGTCGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAGCTGTCGTTTACCGGCTCGACCGAAATTGGTCGTCAG TTAATGGAACAGTGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTGGGCGGCAACGCACCGTTTATTGTCTTTGACGA TGCCGATCTCGATAAAGCCGTGGAAGGAGCGCTGGCCTCGAAATTCCGTAACGCCGGGCAAACCTGCGTCTGCGCCAACC GCCTGTATGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCACATCGGTGAC GGGCTGGAAAAAGGCGTCACCATTGGGCCACTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATCGCCGATGC GCTGGAGAAAGGCGCGCGCGTGGTTTGCGGAGGCAAAGCGCATGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGG TGGATGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGATGAA ACCGATGTGATTGCGCAGGCCAATGACACCGAGTTTGGCCTTGCCGCCTATTTTTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAGGCGCTGGAATACGGCATCGTCGGTATCAATACCGGCATTATTTCCAATGAAGTGGCCCCGTTCGGCG GCATAAAAGCCTCGGGGCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTATTTAGAAATCAAATACATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIEVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFSVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE TDVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-158 | 66 |
