Gene Information

Name : sgbU (EFER_3580)
Accession : YP_002384655.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Unknown
Product : L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : -
Position : 3664534 - 3665394 bp
Length : 861 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
GTGCGTAATCATCCGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAA
AAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAGCGTCTGTCGCGCCTTGACTGGAGCGCCGCAC
AAAGGACTTCGCTGGTTGCCGCGATGATCGAAACGGGCGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGTTTT
CCTTTTGGTAGCCGTGACGACGCGGCACGCCAGCGAGCACGGGAGATCATGAGCAAAGCAATTCATCTGGCGCGCGATCT
CGGTATTCGCACCATTCAACTGGCGGGCTACGACGTCTATTACGAAGACCATGACGAAGGTACCCGGCAACGTTTTGCTG
AAGGGCTGACGTGGGCTGTCGAACAGGCGGCGGCATCACAAGTAATGCTGGCGGTGGAGATTATGGATACCGCGTTTATG
AACTCCATCAGCAAATGGAAAAAGTGGGACGAGATGCTCGCCTCGCCGTGGTTCACCGTCTACCCGGACGTCGGCAACCT
TAGCGCGTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATTGACCGTATCGCCGCCATCCACCTGAAAGACACCC
AGCCAGTCACCGAGCAAAGCCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTC
AAAACGCTGCATGAACTGAACTATCGCGGATCATTTCTGATTGAGATGTGGACCGAAAAAGCCAAAGAGCCGGTGCTGGA
GATTATTCAGGCACGGCGCTGGATTGAAGCGCGTATGCAGGAGGCCGGATTTATATGTTAG

Protein sequence :
MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRF
PFGSRDDAARQRAREIMSKAIHLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLTWAVEQAAASQVMLAVEIMDTAFM
NSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEQSPGQFRDVPFGEGCVDFVGIF
KTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 3e-63 55