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Name : yghD (EFER_2924) Accession : YP_002384023.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : general secretion pathway protein YghD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3149 EC number : - Position : 2991897 - 2992433 bp Length : 537 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACA ACACCTGGCGGGGCGTTCGCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGCCGGATATTACG TCCTCATCTGGCAGCCTTTGAGCGAACGGATTGAGCAACAGGAGACAATATTGCAGCAACTGGAGGCGATGAACACCCGA CTGAAGCGCGCCGCGCCGTATATTATTGCAGCGCGAAACTCCGCCACAACAACGCCTGTGCAGGTATCGCGGGTCATCAG TGACAGTGCTTCCGCGCACTCGGTGGTCATCAAACGGATAGCCGAGCGAGGGGAGAATATTCAAGTCTGGATAGAACCGG TGGTGTTTAATGACCTGCTGAACTGGTTAAACGCGCTGGATGAAAAGTATGCGCTGCAGGTGACACAAATTGATGTTAGC ACAGGTGAAAAGGCAGGAATGGTGGAGGTGCAGCGACTGGAATTTGGGCGGGGCTGA Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSAGYYVLIWQPLSERIEQQETILQQLEAMNTR LKRAAPYIIAARNSATTTPVQVSRVISDSASAHSVVIKRIAERGENIQVWIEPVVFNDLLNWLNALDEKYALQVTQIDVS TGEKAGMVEVQRLEFGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 7e-67 | 92 |
| yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 2e-67 | 92 |
| gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-67 | 92 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghD | YP_002384023.1 | general secretion pathway protein YghD | VFG2056 | Protein | 3e-47 | 91 |
