Gene Information

Name : EFER_2920 (EFER_2920)
Accession : YP_002384019.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2988773 - 2989144 bp
Length : 372 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter

DNA sequence :
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGATCGCACTGGCGATTTTTGCGCTGGCTGCCACGGCGGTATTACAGAT
CGCCAGCGGCGCGCTGAGTAATCAGCAAATTCTTGAGGAAAAAACGGTAGCGGGCTGGGTAGCCGAAAACCAGACCGTAC
TGCTCTACCTGATGACCCGCGAACAACGGGCGGTCAGGCACCAGGGCGAGAGCGATATGGCAGGAAGCCGCTGGTTCTGG
CGAACCACACCACTGAATACCGGTAATGCGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGAAGACTTTTCGTC
AGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence :
MKRGFTLLEVMIALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTVLLYLMTREQRAVRHQGESDMAGSRWFW
RTTPLNTGNALLQAVDIEVSLHEDFSSVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-43 97
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 4e-42 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_2920 YP_002384019.1 type II secretion protein VFG2052 Protein 4e-43 93