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Name : yghF (EFER_2914) Accession : YP_002384013.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : type II secretion protein GspC Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3031 EC number : - Position : 2981978 - 2982931 bp Length : 954 bp Strand : + Note : part of the general (type II) secretion pathway (GSP), a signal sequence-dependent process responsible for protein export; involved in trans-location of exoproteins from the cytoplasm to the periplasm DNA sequence : TTGGCGCGGGTTGTTTTTCGTGACGCACGAATTTATCTCATTCAATGGCTGACTAAAATTCGTCACACTCTTAACCAGAG ACAATCTCTTAATACAAACAAAGAGCATCTTCGCAAAATTGTACGCGCGATGTTCTGGCTGATGCTGCTTATTATTTCTG CAAAAATGGCGTATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATATACGGCGGTTTCTCAATCGGTGAATAAACCG CCCCGCGCGGATGCAAAACCGTTCGATAAAAATGACGCGCAATTAATCAGCCAGCAAAACTGGTTTGGTAAATATCAGCG CGTCGCCACACCGGTAAAGCAACCTGAACCTGTAGCAGAAACGCGTCTTAATGTGGTGCTGCGCGGGATCGCCTTTGGTG CCAGACCCGGCGCGGTTATTGAAGAAGGTGGCAAACAGCAGGTCTATTTGCAGGGTGAACGGCTTGGCTCTCACAACGCA GTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGCTATCAGGGAAAAATAGAGCGGCTCAGTCTGGCAGAAGAGGA GCGTTCCACCGTAGCCGTGACCAACAAAAAAGCCGTCAGTGACGAAGCAAAGCAAGCTGTTGCTGAGCCTGCTGCCAGTG CGCCCGTTGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAGCTTACG CCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGTGAAACCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAA GGAAGGCGATATCGCCATTGCACTAAATCAGCAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGCAATTAC CTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCTACGACATTTCCATCGCGCTGCGCTAA Protein sequence : MARVVFRDARIYLIQWLTKIRHTLNQRQSLNTNKEHLRKIVRAMFWLMLLIISAKMAYSLWRYFSFSAEYTAVSQSVNKP PRADAKPFDKNDAQLISQQNWFGKYQRVATPVKQPEPVAETRLNVVLRGIAFGARPGAVIEEGGKQQVYLQGERLGSHNA VIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQAVAEPAASAPVEIPAAVRQALAKDPQKIFNYIQLT PVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARYDISIALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-109 | 96 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghF | YP_002384013.1 | type II secretion protein GspC | VFG2046 | Protein | 4e-108 | 94 |
