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Name : yghJ (EFER_2911) Accession : YP_002384010.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : inner membrane lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 2975950 - 2980521 bp Length : 4572 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1644747; Product type lp : lipoprotein DNA sequence : TTGCGTTACGATTCCGTCAACTTAATTTATTCACTTGCGTTATTAATGAGTAAGAAATTTAAATATAAGAAATCGCTTTT AGCGGCTATTTTGAGTGCAACGTTATTAACGGGCTGTGACGGTGGTGGCTCAGGCTCTTCTTCTGCCAATCCACCTGGAG ATTCTGGCTCTGGTTCCATCCCGGATGTTAATCCAAATCCAACACCAGATCCGGAACCGACGCCGACACCTGATCCAGAC CCGGAACCCACTCCAGACCCGGAGCCTGAACCAACGCCCACTAAAACCGGTTATCTGACCCTGGGGGGAAGCCAACGGGT AAGTGGCGCTTTCTGTAATAACGCACCCAGTGTTGGCTTCACCTTTACGCCCGGCGATACGGTTACCTGCGTAATCGGCG GTACGACTATCGCCACATTTGACACTCTGGCGGAAACGGCACGCAGCCGCAGTGATGTAGAGAAAGTGGCGTTTAGCCTC GAGGATGCGCAGGAGCTGGCCAGCTCTGAGAATAAGAAAAACAATGCGCTCGCCCTGGTGACTTCCAGCAACAGCTGCCC GTCAGATGATGAACAGGTCTGTCTGAACTTCACATCTGTGGTTGATCGCGCACGCTTTGAAAAACTGTATAAGCAGATTG ATCTGGCAAAGGAAGATTTCCAAAAGCTGGTGAATGAAGAGGTGGAAAACAATGCCGCCACTGATAAAGCACCATCGACT CATACGTCACCGGTTGTGCCTGCCACTACACCGGGTACAACGCCGGATCTGAATGCTAAATTCGTATCGGCAAATGCCGA ACAGTTTTATCAGTATCAACCTACTGAAATTATTCTCTCCGAAGGCCGTCTGGTGGATAGCCTGGGCAATGGTGTTGTTG GCGTAAATTACTACACCAGCTCAGGCCGTGGCGTAACTGGCGAAAATGGCAAATTCTCCTTTAGCTGGGGCGAAACCATC TCCTTTGGCATCGACACATTTGAGCTGGGATCGGTACGCGGTAATAAATCGACCATTGCATTGACTGAGCTGGGTGACGA AGTTCGTGGAGCGAATATCGATCAGCTTATTCATCGTTACTCCCAGGCTGGAGAAAATAACGATCGTGAGATCCCGGATG TGGTCCGCAAGGTCTTTGCCGAGTATCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAATGGCGCGACGCTG AACGAAGGCGATCAAACCGTTGAGCTGCCAAACGAATTTCTTGCACAGCTTAAATCCGGGCAAGCAAAAGAGATCGATAC CGCGATTTGCAACACAACCGGGAGCTGTAACTCTCCACGCTGGTTCTCACTGACAGCGCGCAACATTAATGAAGGTCAAA TTCAGGGCGTTATCAACAAGTTGTGGGGAGTGGACGAGGATTACAAATCCGTGTCGAAATTCCACGTTTTCCATGACTCC ACCAACTTCTATGGCAGTACGGGTAACGCCCGTGGTCAGGCGGTGATTAATATCTCTAACGCGGCCTTCCCGATTCTGAT GGCGCGTAATGATAAAAACTACTGGCTGGCCTTCGGCGAGAAACGTGCCTGGGATAAAAATGAGCTGGCGTACATTACTG AGGCGCCTTCCATTGTGCGACCAGAGAACGTGACACGCGAAACCGCCACCTTCAACCTGCCGTTTATCTCGCTGGGGCAA GTGGGCGATGGCAAGCTGATGGTTATCGGTAACCCACACTACAACAGCATCCTGCGTTGCCCGAACGGTTACAGCTGGAA CGGGGGCGTTAATAAAGACGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACATGCTGC GCTATCTGTCAAATGATCGCTGGTTGCCGGATGCAAAATCCAATATGACCGTGGGTACTAACCTGGATACGGTGTATTTC AAAAAACATGGCCAGGTGCTGGGAAATAGCGCACCGTTTGCGTTCCATAAGGATTTCGCTGGCATCACGGTCAAACCGAT GACCAGCTATGGCAATCTGAATCCAGATGAAGTTCCTCTGTTGATCCTCAATGGCTTTGAATACGTCACACATTGGGGTA GCGATCCTTACTCCATTCCTCTGCGAGCAGATAGCAGTAAACCGAAGCTGACTCAGCAGGATGTGACCGATCTGATCGCC TATATGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCATCTGGCTTTGT ACGTCTGCTTGATGCTGCAGGTTTGTCGATGGCGCTTAACAAGTCGGTAGTAAATAACGATCCGCAAGGCTACCCGGACC GTGTTCGTCAACGACGTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTGTCGATGGTAAACCACCGTATACCATT GATGACACCACGAAAGAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAG CTGGCAGGAAGAAGTTGAGGGTAAACAGGTAACCCAATTCGCCTTTATAGATGAAGCCGACCACAAAACGCCTGAGTCAC TGGCTGCGGCAAAGCAGAGAATTCTGGACGCGTTCCCTGGGCTGGAAGAGTGTAAGGATTCTGACTACCACTATGAGGTC AACTGTCTGGAATACCGTCCAGGCACGGATGTGCCGGTAACCGGTGGCATGTTTGTTCCACGCTATACGCAACTTAATCT TGACGCCGACACCGCGAAAGCGATGCTGCAGGCTGCGGATTTAGGCACCAACATCCAGCGTCTGTATCAACATGAGCTTT ATTTCCGTACCAATGGCCGCCAGGGTGAGCGTCTCAACAGCGTTGATCTGGAACGTTTATACCAAAACATGTCCGTCTGG CTGTGGAACGAGACGAAATACCGTTATGAAGAGGGTAAAGAAGACGAGCTGGGCTTTAAAACGTTCACTGAGTTTCTGAA CTGCTACACCAACAATGCATACGTTGGTACGCAGTGTTCTGCTGAGCTGAAAAAATCGCTGATTGATAACAAGATGATTT ACGGTGAAGAAAGCAGCAAAGTGGGAATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGCCTG ATGCTGGGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTTGAGAAGTATCCGGGAGTGGTGGATACAAACGGCGA AACCGTCACACAAAACATTAACTTGTACTCAGATCCAACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGTGGG CACCTGCCCAGCAGGAAGTCAGCATTGAGTCAAAGGCGACAGTTCCTGTGACCGTGACTGTTGCGCTGGCCGACGACCTG ACAGGACGAGAGAAGCATGAAGTTAGCCTGAACCGTCCGCCCAGAGTGACGAAAACCTATGATCTGAAAGCCAATGATAA GGTGACGTTCAAAGTCCCTTACGGCGGTCTGATTTACATCAAAGGCGACAGCAAAGAGGTGCAATCAGCTGACTTCACCT TTACCGGTGTAGTAAAAGCGCCGTTCTATAAAGACGGTAAGTGGCAACACGATCTGAACTCCCCTGCCCCGCTGGGCGAA CTGGAGTCTGCGTCGTTTGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACGGGCGGACTGGAGCAATT CGCTAAAGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTGATAGCGAAAGCGGTAACCACCGGATGT TTACCTATAAAGCATTGACGGGGCATAAACATCGTTTCGCCAACGATGTGCAGATCTCCATTGGTGACGCGCACTCGGGT TATCCGGTGATGAACAGCAGTTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCA CGAAGTGGGGCACAACGCCGCCGAAACGCCGCTGACTGTTCCAGGCGCGACCGAAGTGGCGAACAATGTGCTGGCGCTGT ACATGCAGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAGAGC AACAACCAGGCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAACTGAAGGAATGGGCAGAGAAGAA CTTTGATATCAAGAAGTGGTATCCAGATGGCAATCTGCCAGCGTTCTACAGCGATCGTGAAGGGATGAAAGGCTGGAACC TGTTCCAGTTGATGCATCGTAAAGCACGCGGCGATGAGGTTGGCGACAAAACCTTTGGCGGCAAGAATTACTGTGCTGAA TCCAACGGTAACGCAGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGACCTTTCCGCATTCTTTAAGAA ATGGAATCCGGGTGCGAATGCTTACCAGTTGCCGGGAGCGACGGAGATGAGCTTCGAAGGCGGTGTGAGCCAGTCGGCTT ACAACACGCTGGCGTCGCTCAAGCTGCCGAAACCGGAACAGGGGCCGGAAACCATTAACAAGGTTACCGAGTATTCGATG CCTGCTGAATAA Protein sequence : MRYDSVNLIYSLALLMSKKFKYKKSLLAAILSATLLTGCDGGGSGSSSANPPGDSGSGSIPDVNPNPTPDPEPTPTPDPD PEPTPDPEPEPTPTKTGYLTLGGSQRVSGAFCNNAPSVGFTFTPGDTVTCVIGGTTIATFDTLAETARSRSDVEKVAFSL EDAQELASSENKKNNALALVTSSNSCPSDDEQVCLNFTSVVDRARFEKLYKQIDLAKEDFQKLVNEEVENNAATDKAPST HTSPVVPATTPGTTPDLNAKFVSANAEQFYQYQPTEIILSEGRLVDSLGNGVVGVNYYTSSGRGVTGENGKFSFSWGETI SFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSQAGENNDREIPDVVRKVFAEYPNVINEIINLSLSNGATL NEGDQTVELPNEFLAQLKSGQAKEIDTAICNTTGSCNSPRWFSLTARNINEGQIQGVINKLWGVDEDYKSVSKFHVFHDS TNFYGSTGNARGQAVINISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQ VGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENMLRYLSNDRWLPDAKSNMTVGTNLDTVYF KKHGQVLGNSAPFAFHKDFAGITVKPMTSYGNLNPDEVPLLILNGFEYVTHWGSDPYSIPLRADSSKPKLTQQDVTDLIA YMNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYTI DDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKQRILDAFPGLEECKDSDYHYEV NCLEYRPGTDVPVTGGMFVPRYTQLNLDADTAKAMLQAADLGTNIQRLYQHELYFRTNGRQGERLNSVDLERLYQNMSVW LWNETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKVGMMNPSYPLNYMEKPLTRL MLGRSWWDLNIKVDVEKYPGVVDTNGETVTQNINLYSDPTKWFAGNMQSTGLWAPAQQEVSIESKATVPVTVTVALADDL TGREKHEVSLNRPPRVTKTYDLKANDKVTFKVPYGGLIYIKGDSKEVQSADFTFTGVVKAPFYKDGKWQHDLNSPAPLGE LESASFVYTTPKKNLNASNYTGGLEQFAKDLDTFASSMNDFYGRDSESGNHRMFTYKALTGHKHRFANDVQISIGDAHSG YPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEES NNQAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPDGNLPAFYSDREGMKGWNLFQLMHRKARGDEVGDKTFGGKNYCAE SNGNAADTLMLCASWVAQTDLSAFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLKLPKPEQGPETINKVTEYSM PAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 85 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_002384010.1 | inner membrane lipoprotein | VFG0106 | Protein | 0.0 | 49 |
