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Name : int (EFER_2806) Accession : YP_002383909.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Unknown Product : Integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2872100 - 2873269 bp Length : 1170 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin DNA sequence : ATGAAGCTGACTGCTCGTCAGGTTGAAACTGCAAAACCTAAAGATAAGCCCTACAAACTCGCTGATGGTGGTGGTCTTTA CCTGCTGGTTAATCCCAATGGCAAAAGATACTGGCGTCTCAAATACCGTTCACTAGGCAAAGAGAAGCTGCTCGCTATTG GCGTTTACCCTGATGTTTCTTTAGCTGAAGCCAGAAGTAAGCGTGAGGATGCTAAAAGAACATTAGCTGTTGGCAATGAT CCTTCTCTTGAACGAAAAATTGAGAAACTTAGCCGTCAACAGGACGCAGAAAACTCGTTTGAGGCTATCACGCGGGAGTG GTATCAGCGTCGCTATGACCGCTGGTCTGTCTCCTACCGCGAAGAGATGCTAAGAACCTTTGAAAAGGATGTATTTCCTT ATATCGGTCACCGGCCAATCAAAGATATCAAGCCGATGGAGCTGCTTGCTGTTCTTTCAAAGATAGAAGCACGAGGAGCA ACTGAGAAGGTACGTAAGGTTCGTCAACGTTGTGGAGAAGTCTGGAAGTATGCCGTTGTGACTGGCAGAGCCGAGTACAA TCCAGCACCTGATCTAGCCAGCGCCGTGACTCCACATGAGAAAGAACACTATGCTTTTTTAACCCAGGATGAATTACCAG AGTTTCTTCGGACTCTGAATACCTATGCCGGTAGTGTGCTTGTTAAGATTGCGATGCAATTACTTATTTTGACTGGAGTA AGGCCTGGGGAATTGAGGCAAGCGGAGTGGCAGGAGTTTGATTTTGAGCGGAAGGTTTGGAACGTGCCAGCAGAGCGCAT GAAAATGCGCCGCCCTCATCTGGTTCCGTTATCAAGCCAGGCAATTGACCTACTTAATCAGCTTAAACCTATGACAGGTG CAGGTGCGTTGCTGTTCCCTGGGCGTAATAATCCTAAGAAATCGATGAGTGATATGGCATTGATTGTGTTGGTTAGGCGT ATCGGCTATGCCGGGCGCGTTACGGGGCACGGATTCCGCCACACGATGAGTACTATTTTGCATGAGCAGGGATTTAACTC GGCCTGGATTGAGTTACAGCTGGCTCACGTCGATAAGAACTCAATTCGTGGGACATATAACCATGCTCAATATCTGGAGG GGCGGAGGGAGATGATGCAGTGGTATGGAGATTTGATCATTAATAATTGA Protein sequence : MKLTARQVETAKPKDKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVSLAEARSKREDAKRTLAVGND PSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYREEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGA TEKVRKVRQRCGEVWKYAVVTGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV RPGELRQAEWQEFDFERKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFPGRNNPKKSMSDMALIVLVRR IGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKNSIRGTYNHAQYLEGRREMMQWYGDLIINN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 7e-130 | 65 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 3e-130 | 65 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 1e-124 | 64 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 2e-129 | 64 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 1e-129 | 64 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 1e-129 | 64 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 2e-129 | 64 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 3e-128 | 64 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 5e-128 | 64 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 6e-128 | 64 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 6e-128 | 64 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 3e-117 | 59 |
| STY4821 | NP_458899.1 | integrase | Not tested | SPI-10 | Protein | 1e-75 | 44 |
| SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 7e-74 | 42 |
| SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 7e-74 | 42 |
| ECO111_3718 | YP_003236059.1 | putative integrase | Not tested | LEE | Protein | 4e-72 | 41 |
| c5216 | NP_757064.1 | prophage P4 integrase | Not tested | PAI II CFT073 | Protein | 2e-74 | 41 |
| APECO1_3534 | YP_854214.1 | P4-like integrase | Not tested | PAI I APEC-O1 | Protein | 1e-74 | 41 |
| ORF_1 | AAZ04412.1 | phage integrase | Not tested | PAI I APEC-O1 | Protein | 9e-75 | 41 |
| c3556 | NP_755431.1 | prophage P4 integrase | Not tested | PAI I CFT073 | Protein | 2e-74 | 41 |
| int | AAL51003.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-74 | 41 |
| int | AAT48697.1 | CP4-like integrase | Not tested | PAI I 4787 | Protein | 2e-74 | 41 |
| int | AAK16198.1 | Int | Not tested | PAI-I AL862 | Protein | 5e-75 | 41 |
| int | ADD91747.1 | P4 integrase | Not tested | PAI-I AL862 | Protein | 5e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| int | YP_002383909.1 | Integrase | VFG0783 | Protein | 8e-130 | 64 |
| int | YP_002383909.1 | Integrase | VFG0598 | Protein | 3e-128 | 64 |
| int | YP_002383909.1 | Integrase | VFG1693 | Protein | 8e-75 | 41 |
