Gene Information

Name : EFER_2778 (EFER_2778)
Accession : YP_002383884.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3710
EC number : -
Position : 2845989 - 2846912 bp
Length : 924 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin

DNA sequence :
ATGACGAGTACAGGTAAAAAAACAATCAGCATTACTTCTATATATGCAATAATAGCTATATTAACTCAGAGATATTCCGG
GTTATTTAATTTTATCAACATGTCTTGTGACGTATATATGTACTGGATTATTAACGAGTTTATTGAATTTAGACCCGCGA
GTAAAAAGCTCATTTCCCGGAGAAATCCTGAGCTTAATGTTGTATTAACGTCACCAGCCAGTCGTTGTCTGCTTCTTTTA
CTTGAAGCCTCTCCTGATGTCGTTTCCCAACAAGAACTTTTCAAAAAAGTGTGGGAAGATGAAGGAATGTATGTTCCGAC
CAACACCCTTTACCAGAATATTTCCATTGTCCGTCGGGGGCTGAAAGCGGTAGGTGAAACGGAACAAACACTGATAGCCA
CCATACCGCGCAAAGGGTTTAAGATTGAGCAGGGCGTTAAGATTGTCCGCATGGCTTCAGACGAACTTTTCCCTGAAGAA
GAGCAAGAAGAAGAACAGACAGGTAATGCAGAGGAATTGTTATTACCCGTAAATGAGCATCAGCAACCACGAATATCTCT
GATGTCGCGTTTATCTCTGGTTTTTATCATGCTCTTAGCCTTTATTGTTGGCGCTACCGGAATGCATTTTTATTGGCATT
CCGGGGAAACCACGCCCTTTTTCGCGGACTACAAACTGCTCGAGCAAGAGAATGGTTGTCATTTCTATGTTAAAGATGAC
AGCCATGATGGTGACAATAATTTTGCGCGAATCAAAACGCTCATCACCCGTACCGGACTGGATTGTAAAAAATATCCCTG
GGTTTATCTTCCACTCTCAAAAACCGATCCAGGGTTGGCAGTATTAGTTTGTAAGAAAGACTATCTTGTTCATTCTGTTC
CTGGCTGCATGACACTCTCATTTCGCGAGGCTTACGGTGAGTAA

Protein sequence :
MTSTGKKTISITSIYAIIAILTQRYSGLFNFINMSCDVYMYWIINEFIEFRPASKKLISRRNPELNVVLTSPASRCLLLL
LEASPDVVSQQELFKKVWEDEGMYVPTNTLYQNISIVRRGLKAVGETEQTLIATIPRKGFKIEQGVKIVRMASDELFPEE
EQEEEQTGNAEELLLPVNEHQQPRISLMSRLSLVFIMLLAFIVGATGMHFYWHSGETTPFFADYKLLEQENGCHFYVKDD
SHDGDNNFARIKTLITRTGLDCKKYPWVYLPLSKTDPGLAVLVCKKDYLVHSVPGCMTLSFREAYGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 7e-65 49
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 5e-54 42
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 3e-54 42
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 4e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_2778 YP_002383884.1 regulatory protein VFG0570 Protein 2e-54 42