|
Name : ribD (EFER_2611) Accession : YP_002383717.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Unknown Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 2680828 - 2681931 bp Length : 1104 bp Strand : - Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a DNA sequence : GTGCAGGACGAGTATTACATGGCGCGGGCGCTTAAGCTGGCGCAGCGGGGGCGTTTTACCACTCATCCGAACCCGAATGT TGGGTGTGTCATTGTGAAAGATGGCGAAATCGTCGGTGAAGGTTACCATCACCGTGCTGGTGAACCACACGCCGAAGTAC ATGCGCTGCGTATGGCTGGAGAGAAAGCCAAAGGAGCGACTGCGTATGTGACACTCGAACCTTGCAGCCATCACGGCCGT ACGCCGCCTTGCTGTGATGCATTAATTGCCACAGGTGTGGCTCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGT AGCCGGGCGAGGGCTATATCGCCTGCAACAAGCGGGTATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAAT TGAATAAAGGCTTTCTCAAACGCATGCGTACCGGCTTTCCTTATATCCAGTTGAAACTTGGCGCATCGCTTGATGGTCGC ACAGCGATGGCGAGCGGTGAGAGCCAGTGGATCACTTCACCTCAGGCGCGGCGTGATGTACAACGTCTGCGCGCGCAAAG TCATGCCATTTTAACCAGTAGCGCTACGGTACTGGCGGACGATCCGGCCTTAACGGTGCGTTGGTCTGAACTGGATGAAC AAACTCAGGCCCTTTATCCGCAACAAAATCTACGCCAGCCGGTACGTATTGTCATTGATAGCCAAAATCGCGTGACGCCT GAACATCGCATCGTGCAGCAGCCTGGCGAAACCTGGTTTGCGCGTACACAGGAAGATTCTCGAGAATGGCCGGAGACAGT GCGTAGTTTGCTCATCCCGGAACATAACGGACATCTGGATTTGGTGCTGCTCATGATGCAGCTGGGTAAACAGCAGATTA ACAGCATATGGGTTGAAGCGGGGCCAACACTGGCAGGGGCACTACTACAGGCAGGTTTAGTCGATGAGCTGATTGTCTAT ATCGCGCCTAAACTATTAGGCAGCGACGCTCGTGGATTATGTACGCTGCCAGGGCTTGAGAAATTAGCTGATGCGCCCCA TTTTAAATTCAATGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGA Protein sequence : MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGR TPPCCDALIATGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTP EHRIVQQPGETWFARTQEDSREWPETVRSLLIPEHNGHLDLVLLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVY IAPKLLGSDARGLCTLPGLEKLADAPHFKFNEIRHVGPDVCLHLVGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-65 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-65 | 47 |
