Gene Information

Name : ibrB (EFER_2492)
Accession : YP_002383601.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : immunoglobulin-binding regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 2554056 - 2554673 bp
Length : 618 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12057959; Product type r : regulator

DNA sequence : 
ATGAAACAACATTTAAAGCAGGAGTTAACCCATTTTCTTGCCAGTTTGCCAGAAGACGAAAGAGTAGAGGCAATCAACGA
GTTTCGCCAGGCGATCCATAAAGTCAGCCCTTTCCGTGAGGAGCCGGTGGACTGCGTGCTCTGGGTAAAAAAAGAACAGC
TCAAGCCAAACAATTACAACCCCAATAATGTTGCACCACCAGAGAAAAGACTGTTACAGGTCTCTATAGAGACTGACGGC
TTTACCCAACCCATTGTCGTTTCGCCATCCAGCCAAAATGAGTATGAGATTGTCGATGGTTTCCACCGTCACCTGGTGGG
TAAAGAGAACGGTACACTAGGTGTAAGGCTAAAAGGTTATCTGCCAGTGACCTGTCTGGATGGCAATCGCCACGAACGCA
TCGCCGCAACTATTCGTCATAACCGCGCTCGTGGCCGCCACCAAATCACAGCCATGTCAGAAATCGTTCGTGAACTCAGC
CAGTTGGGATGGGACGACAATAAAATCGGCAAAGAGCTGGGTATGGACAGCGACGAAGTGTTGCGCCTGAAACAAATTAA
CGGCCTGCAAGAGTTATTTGCTGACCGTCAATATTCCCGTGCCTGGACAGTAAAATAA

Protein sequence : 
MKQHLKQELTHFLASLPEDERVEAINEFRQAIHKVSPFREEPVDCVLWVKKEQLKPNNYNPNNVAPPEKRLLQVSIETDG
FTQPIVVSPSSQNEYEIVDGFHRHLVGKENGTLGVRLKGYLPVTCLDGNRHERIAATIRHNRARGRHQITAMSEIVRELS
QLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-51 61
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 1e-51 61
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 1e-51 61
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-51 61
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 9e-52 59
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-39 59
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-39 59
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-39 59
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 5e-50 58
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 5e-52 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ibrB YP_002383601.1 immunoglobulin-binding regulator VFG1505 Protein 2e-50 58