Gene Information

Name : ibrA (EFER_2491)
Accession : YP_002383600.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : immunoglobulin-binding regulator
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 2552809 - 2554059 bp
Length : 1251 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12057959; Product type r : regulator

DNA sequence : 
TTGACATTATTCAACCAGAATTTATGTGAGAGCATTGTGATGTCTATTCATAAAATTCCTCTTTTCATTAATGTCCTCGA
CGCTGCGAGGGAGCGCATTCATTGGACGCTAAAAAATTTAGATCGCGTTTGCGTATCCTTTTCCGGTGGTAAAGACTCTG
GAGTGATGTTACACCTCACCGCCCAGCTTGCTCGTCAGTTGAACAAAAAAATATTCGTTTTATTTATTGATTGGGAAGCT
CAATTCAATCACACCATTAATTATGTCCAGGCCATAAATGATCAATATGCTGACGTCATCGATACCATTTACTGGATCGC
TTTACCGCTCACCACGCAAAATGCTCTATCACAGTACCAACCACAATGGCAGTGCTGGGAGCCCGACACAGAATGGGTTC
GCCAGCCTCCTACGACAGCCATAACATCCCCTGATTACTTTCCTTTTTACCAGGAAGGTATGACTTTCGAGCACTTTGTT
CGCGAATTTGCCGACTGGTTTTCACAGCAACGTCCGGCAGCAATGCTAATCGGTATACGGGCCGATGAATCCTATAACCG
CTTTGTTGCAATCGCCACTGAGCACAAGAAACGTTTTGCCGACGACAAACCCTGGACGACATTAGCCCCCGGAGGTCACA
CCTGGTACATTTACCCGATTTATGACTGGAAAACAGCCGATATCTGGACATGGTATGCAAAAACCAATTCGCTCTGTAAT
CCTCTGTACAATGTAATGTACCAGGCGGGCGTTCCCTTACGCTATATGAGGATTTGTGAACCTTTTGGCCCGGAACAGAG
ACAAGGATTGTGGTTATACCACGTCATTGAACCAGAGCAATGGGCAAAGATGTGCGCCCGAGTCAGTGGCGTAAAAAGCG
GGGGAATTTACGCCGGACAGGACAACAAGTTTTATGGTCACCGAAAACTGCTTAAACCCGATCACCTTAGCTGGCAGGAG
TATGCCCTGCTATTACTCAACAGTATGCCAGAACATACCGCAGAGCATTATCGTAATAAGATCGCCGTTTACCTGAAATG
GTACAAGAAGAAAGGAATGGACGAAATTCCCCAGACCCAACAAGGTGATATCGGTGCAAAGGATATTCCATCCTGGAGGC
GCATTTGTAAGGTGCTGCTTAATAACGATTACTGGTGCCGGGCACTGTCATTCAGCCCAACAAAATCTCAACATTATCAA
CGGTATAGCGAACGAATTAAAGCCAAACGCAAACTCTGGGGAATATTATGA

Protein sequence : 
MTLFNQNLCESIVMSIHKIPLFINVLDAARERIHWTLKNLDRVCVSFSGGKDSGVMLHLTAQLARQLNKKIFVLFIDWEA
QFNHTINYVQAINDQYADVIDTIYWIALPLTTQNALSQYQPQWQCWEPDTEWVRQPPTTAITSPDYFPFYQEGMTFEHFV
REFADWFSQQRPAAMLIGIRADESYNRFVAIATEHKKRFADDKPWTTLAPGGHTWYIYPIYDWKTADIWTWYAKTNSLCN
PLYNVMYQAGVPLRYMRICEPFGPEQRQGLWLYHVIEPEQWAKMCARVSGVKSGGIYAGQDNKFYGHRKLLKPDHLSWQE
YALLLLNSMPEHTAEHYRNKIAVYLKWYKKKGMDEIPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKSQHYQ
RYSERIKAKRKLWGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 7e-121 59
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 2e-121 59
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-122 59
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-122 58
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 5e-121 58
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 5e-121 58
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-121 58
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-121 58
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-124 57
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 3e-124 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ibrA YP_002383600.1 immunoglobulin-binding regulator VFG1504 Protein 6e-123 59