Gene Information

Name : EFER_2000 (EFER_2000)
Accession : YP_002383126.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : membrane transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 2056096 - 2056497 bp
Length : 402 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter

DNA sequence : 
ATGTCTTCGAAAACAAAATGTTGGCTATGGATGTTACTGGTCATCCTGTCTGAAACCTCTGCAACATCCACACTTAAAAT
GTTTGATAACAGTGAGGGGATGATAAAAACGCTGCTGCTGGCCCTGATCGTCGTACTGTATTGTATTTGTTACTACTCGC
TTTCACGGGCAGTAAAAGATATCCCCGTTGGTCTGGCTTACGCCACATGGTCCGGTACTGGCATTTTGATGGTCTCAACC
CTTGGGATTTTGTTTTACGGTCAACACCCGGATACCGCCGCCATTATTGGTATGGTCATCATCGCAAGCGGTATTGTCAT
TATGAATCTGTTCTCAAAAATGGGCAGTGAAGAGGCGGAAGAAACGCCAGTTACCAACCTCGATAAAAAAATCGCTAACT
AA

Protein sequence : 
MSSKTKCWLWMLLVILSETSATSTLKMFDNSEGMIKTLLLALIVVLYCICYYSLSRAVKDIPVGLAYATWSGTGILMVST
LGILFYGQHPDTAAIIGMVIIASGIVIMNLFSKMGSEEAEETPVTNLDKKIAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 7e-56 99
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_2000 YP_002383126.1 membrane transport protein BAC0002 Protein 8e-13 45
EFER_2000 YP_002383126.1 membrane transport protein NC_010410.6003348.p0 Protein 8e-13 45
EFER_2000 YP_002383126.1 membrane transport protein BAC0377 Protein 1e-11 43
EFER_2000 YP_002383126.1 membrane transport protein BAC0322 Protein 4e-14 42
EFER_2000 YP_002383126.1 membrane transport protein BAC0324 Protein 5e-13 41
EFER_2000 YP_002383126.1 membrane transport protein CP004022.1.gene1549. Protein 8e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_2000 YP_002383126.1 membrane transport protein VFG1587 Protein 3e-56 99
EFER_2000 YP_002383126.1 membrane transport protein VFG1586 Protein 1e-15 43