Gene Information

Name : EFER_1978 (EFER_1978)
Accession : YP_002383107.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 2029481 - 2031427 bp
Length : 1947 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGCCAGAAGGAACGCGCTTTACCCTGGAGGCCAGCGGGCTTCCCCCCGACACCTTCGCCGTTGTCACCTTCCACCTCTC
CCAGTCCCTTTCCTCGTTGTTCACCCTCGACGTCACCGCCGTCAGTCACGACCCCGCCATCGATTTCTCCGCCATCATCG
ATGAGGACGTCACCCTGACTATCTGGCAGGGCGACTCCCCACAGCGACGGGTAAAAGGACTGGTCACATGGTGCGAACAG
GGCGATACCGGTAAACACCAGACTCAGTACCGCATGCGTATCCGCCCTCCTTTCTGGCGCTCATCCCTCCGCCAGAACTG
CCGCAGCTACCAGAACCAGGACATCCGCACCATCCTCTTCACCCTGCTCAGAGAGATGGGCGTGCTTTATTACGATGCCC
TCTTTGCACTCCCTCACCCCGCCCGCGAGTTCTGCGTCCAGTTCATGGAAACCGACTTCGATTTCGCACGCCGCCTCATG
GCCGAGGAAGGGATTTACTTCTTTGAAGAGGAAGACCTTCAGGCCGCCACCCAGAAGCTCATCATGGCCGACAAAGCCGG
TTACCAGCAGTCCGCCCTGTCTCTGCCCTATAACCCCAACGGCGACGTCACCCCTGAATACTGTATCCGCAGCTTCCGCC
GCAGCACTCAGATCCGACCGGCTAAAGTGGTTTCCCGGGATTACACCTTTACCGCACCCAACTGGCGCGGGCAGTTTGAG
CGACGCGGTGACAACATGCCTTTCCAGCGTCCCGACTACGAGATTTTCGACTATCCGGGGCGCTTCAAGGATGAACAGCA
CGGCGCGGGCTTTACCCGTTACCAGCTTGAAGGGCTGCGTAATAACGCCGAGTGTGCTGACGGCTCTTCGAACTCCCCGC
AACTGTGGCCGGGAATGCGCTTCACGCTGTCAGCCCATCCGCGCGCGGACCTGAACGTTCTCTGGCAGGTGGTGGAAAGT
GAGCTGCACGGCGAACAACCCCAGGCGCAGGTCGGCCACGGCGGTTCCGGCACCACCCTGGTCAATGACTTTACCGTCAT
TCCCGGACACCAGACCTGGCGTCCTGTCCCTGAACCCAAACCACTGATTGACGGCCCGCAGACCGCCGTTGTCACCGGAC
CGCCGGGCGAGGAAATCTTCTGCGACGAACACGGGCGCGTGCGCGTGAAGTTCACCTGGGACCGCTACAACGCCGCTGAC
CAGGACAGCTCCTGCTGGGTGCGGGTGTCGCAGGCATGGGCCGGAACCGGCTTCGGCAACCTCGCCATCCCCCGCGTGGG
CCAGGAGGTCATCGTGGACTTCCTCAACGGCGACCCCGACCAGCCCATCATCATGGGCCGCACCTACCACCAGGATAACC
GGTCGCCGGGCAGCCTGCCGGGAACGAAGACACAGATGGCGATACGCTCAAAAACCTACAAGGGGAGCGGTTATAACGAA
CTCATGTTTGAGGACAGGACCGGGCAGGAGCTGCTCTCCATGCATGCACAGAAGGATATGTCAACCGTGGTGCTTAATCA
CCGGGTGACGACCGTGGGAGCCAACCATGTGGAATCGGTCACTGGCGTTCAGACCATCGATGTCCAGGCAGGCCAGGCAA
TCAAAGTCCATGCCAGCCACGATCAGAAAGTGAAGGCGATGCACAACACGCTGGTCGGTGAAAATAAAGTCGAGCTGGTC
GCCGGGAAATACCTGATGAACAGCGCGTCAGAAGTCACCATCGCCTGTGGCGATGCCGCCATTACGCTGACCCAGGACGG
CAACATCAACTGGTACTGCAAAAACTTCAATATCTATGCGGACGGAAAAGGTGAGATCACCGCCACCGATACCGTGGATA
TCAACATGGACGGGGCAAAACCCGGAAAGATTGGCGCACACTTTGGCCCCGACGATATCAATAACGCCGTCAAAGCCGCA
TTTCCCCCGCCAGCCCCTGAGAAATAA

Protein sequence :
MPEGTRFTLEASGLPPDTFAVVTFHLSQSLSSLFTLDVTAVSHDPAIDFSAIIDEDVTLTIWQGDSPQRRVKGLVTWCEQ
GDTGKHQTQYRMRIRPPFWRSSLRQNCRSYQNQDIRTILFTLLREMGVLYYDALFALPHPAREFCVQFMETDFDFARRLM
AEEGIYFFEEEDLQAATQKLIMADKAGYQQSALSLPYNPNGDVTPEYCIRSFRRSTQIRPAKVVSRDYTFTAPNWRGQFE
RRGDNMPFQRPDYEIFDYPGRFKDEQHGAGFTRYQLEGLRNNAECADGSSNSPQLWPGMRFTLSAHPRADLNVLWQVVES
ELHGEQPQAQVGHGGSGTTLVNDFTVIPGHQTWRPVPEPKPLIDGPQTAVVTGPPGEEIFCDEHGRVRVKFTWDRYNAAD
QDSSCWVRVSQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQDNRSPGSLPGTKTQMAIRSKTYKGSGYNE
LMFEDRTGQELLSMHAQKDMSTVVLNHRVTTVGANHVESVTGVQTIDVQAGQAIKVHASHDQKVKAMHNTLVGENKVELV
AGKYLMNSASEVTIACGDAAITLTQDGNINWYCKNFNIYADGKGEITATDTVDINMDGAKPGKIGAHFGPDDINNAVKAA
FPPPAPEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 3e-146 52
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-147 52
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 1e-147 52