Gene Information

Name : EFER_1976 (EFER_1976)
Accession : YP_002383105.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2027561 - 2028160 bp
Length : 600 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
GTGATTCTTATTTTTATCGCCACTGGAGCGGCATTGCCGGTATTTTTGTTTGGTACGGATCATGCTGTGTTCAGGGCCAC
AACAAGATGGACTAATCATATGAGCAGCCAAAAATACGGCGGCAGTATTGCGCCTCGCGAGAGAATTAATATCCACTATG
TGCCACGCACTAATGATCAGGCCGCTGAAGTTGAGCTCCCACTTAATATTGTGGTGGTTGGCGACACAAAAGGCGCTCTG
GATGAAACACCTATTGATGAACGCCAGGCGGTGTCCATTAATAAAAACAATTTCCGTTCTGTAATGGCAGAAGTCGGGAT
CAAAACCACGGTGACGGTTGCTGACAAGCTCAGTGAAAAACCTGACGGCGAAATGAGTGTCACCCTGGACATTAAATCAC
TGGATGATTTTTCACCAGACAATATCGCAAGGCAAGTGCCCGAAATGAAGAAAATACTGGAACTGCGTGAGGCTCTCGTT
GCTTTACGTGGACCAATGGGGAATGTCCCTGCATTCCGCGCCCAGCTTCAGGCTTTGCTGGATAACGAAGAAACCCGTGA
GCAGCTCCTCCGGGAACTGGATATCATCGATCAGAAATAA

Protein sequence : 
MILIFIATGAALPVFLFGTDHAVFRATTRWTNHMSSQKYGGSIAPRERINIHYVPRTNDQAAEVELPLNIVVVGDTKGAL
DETPIDERQAVSINKNNFRSVMAEVGIKTTVTVADKLSEKPDGEMSVTLDIKSLDDFSPDNIARQVPEMKKILELREALV
ALRGPMGNVPAFRAQLQALLDNEETREQLLRELDIIDQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-43 57
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 4e-43 57
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 3e-34 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_1976 YP_002383105.1 hypothetical protein VFG2092 Protein 1e-45 58
EFER_1976 YP_002383105.1 hypothetical protein VFG2474 Protein 8e-31 43