Gene Information

Name : EFER_1975 (EFER_1975)
Accession : YP_002383104.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 2026065 - 2027546 bp
Length : 1482 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGTCATTACAGGAAGAGCTTACTTCTCCACTTGCTGAATCGGTTGCTCCACAGCACTCTCTGCTGGATGAAATCATGTC
CAGAACCCGCATCCAGCCTGAGTCAGATGGTTATGATGTAGCCCGGCAGGGCGTTGTGGCATTTATCAGAAGTATTCTGA
CATCTGATACCGGTGATGCAATTAATCGGCTGGCCGTAGACAGGATGATTACAGTACTGGACCAAAAACTCAGTGCTCAG
ACAGACGAGATCCTGCACTCTGAACCCGTACAACAGCTGGAATCATTCTGGCGTTCAATGAAGTTGCTGGTTGACAGAAC
CGATTTCAAAGAAAATATCAAAATTCATTTGATCCACGCCACCAAAGAAGAATTGCTGGAAGATTTTGAATTTGCTCCAG
AAATTGTTCAGTCTGGCTTTTACAAGCATATTTACTCATCGGGATATGGCCAGTTTGGTGGCGAACCCGTGGCTGCCGTG
GTGGGGGCTTATGAATTTAAAAACACCACGCCGGATATGAAGCTGTTGCAGTATGTCAGTGCTGTAGGATCAATGGCTCA
TGCGCCGTTTTTGTCTTCCGTGGCACCGCAATTTTTTGGACTTAATTCATATACCGAACTTCCGACCATTAAAGATCTTT
ATTCTGTCTTTGAGGGCCCGGCTTATACAAAATGGCGTGCGCTGCGTGAGTCTGAAGATTCTCGTTATCTGGGGCTCACG
GCTCCCCGTGTCCTGCTGCGACTTCCTTATTCTCCAACGGAAAATCCGGTTAAATCTTTCTGCTATGAGGAAGATGTCCG
TCATAGACATGAAGACTATTTATGGGGAAATACAGCATTTTTGCTGGCCTGTAGCCTGACGGACTCGTTTTCAAAATATC
GCTGGTGTCCCAACATCATCGGGCCACAGAGTGGCGGTGCAGTAAAAGACTTACCTGTACATTTATATGAATCACTTGGT
CAGATACAAGCCAAAATTCCAACCGAAGTCCTGATTACTGATCGCCGGGAATATGAACTGGCAGAAGAGGGTTTTATCAG
CCTGACCATGCGTAAGGACAGTGATAACGCATGTTTCTTCTCCGCCAACTCGGTGCAGAAACCGAAAGTGTTTCCAAACA
CCAGGGAGGGGAAAGAGGCCGAAACTAACTACAAACTGGGTACTCAGTTGCCCTATATGTTCATTATTACCCGCCTCGCC
CATTTTATTAAAGTGTTGCAACGTGAGCAGATTGGCTCCTGGAAAGAACGTTCCGATTTGGAAAGGGAACTGAATATCTG
GATTCGCCAGTATGTGGCCGACCAGGAAAACCCGCCAGCAGATGTGCGCAGCCGCAAACCGCTCAGGGCTGCGAAGATTG
AAGTGCAGGATGTTGAAGGTGAACCGGGCTGGTACAAGGTCGCGCTCGCCGTGAGGCCGCACTTTAAATATATGGGGGCG
ACATTTGAACTTGCCCTGGTCGGACGTCTGGACAAGGAATAA

Protein sequence :
MSLQEELTSPLAESVAPQHSLLDEIMSRTRIQPESDGYDVARQGVVAFIRSILTSDTGDAINRLAVDRMITVLDQKLSAQ
TDEILHSEPVQQLESFWRSMKLLVDRTDFKENIKIHLIHATKEELLEDFEFAPEIVQSGFYKHIYSSGYGQFGGEPVAAV
VGAYEFKNTTPDMKLLQYVSAVGSMAHAPFLSSVAPQFFGLNSYTELPTIKDLYSVFEGPAYTKWRALRESEDSRYLGLT
APRVLLRLPYSPTENPVKSFCYEEDVRHRHEDYLWGNTAFLLACSLTDSFSKYRWCPNIIGPQSGGAVKDLPVHLYESLG
QIQAKIPTEVLITDRREYELAEEGFISLTMRKDSDNACFFSANSVQKPKVFPNTREGKEAETNYKLGTQLPYMFIITRLA
HFIKVLQREQIGSWKERSDLERELNIWIRQYVADQENPPADVRSRKPLRAAKIEVQDVEGEPGWYKVALAVRPHFKYMGA
TFELALVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 73
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 0.0 73
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 5e-154 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_1975 YP_002383104.1 hypothetical protein VFG2093 Protein 0.0 73
EFER_1975 YP_002383104.1 hypothetical protein VFG2475 Protein 4e-154 57