Gene Information

Name : EFER_1972 (EFER_1972)
Accession : YP_002383101.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 2022786 - 2023823 bp
Length : 1038 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGGCCGGAAAGGACAGGTCAGCACACGCTGATATAGGGCAGGACACCGTTTTTTCAGACGCTTGCAGCTATAACTTTTT
TGCGCTGATGGAGTCCCTGTATCGCCATACCGGACACAGGTCAGTGGTTTCTCTGGATACGGAGCCGGAGGACGAAATTG
CGCATTTTGTCGCTGATGCCAGTCTTGTCTTCCCTAAAAGTGATGTGGTGAGCCTGACGAAAAAAGAGAACGGCCAGTAT
GCCATCACCGTTTCATTTTCAGGTCTGCACGGCAGTCAGTCACCATTGCCCGGTTATTACCTGGATGAACTGGCGCTGGA
GGTTGCTCAGGAAGAAGAGGGGCTGGCAGGTTTTCTTGATCTGTTTGCTCATCGCTGGACGCAATTTCTGTATCACATCT
GGCGAAAATACCGTTATTACGTCTGTTTTCGTAATGGCGGTGTGGATGATTTTTCCCGGCGTATGTATGCACTGGTCGGG
CTGGGAAGCGAATCTCTCCGCGATCAGCTTGCGATTAACCACAGCAAAATGCTGGCCTATGCCGGAACGCTGGCAAGTCC
GGGGCGCTCACCTGAAGTCATCTGTAGTTTGATTTCTCACTGCTTCGATTTACCTGATGTCTCCCTTGAAGGATGGCAGT
TACGCCAGGTGGATATTACGCCAGAAAGGCAAAACCGTTTGGGAATACGGACCGCCCGCACCGGTAAAAAATTTATTGAG
AAGTCGGTGTTGGGAAGCAATTTTACGCTTGGTAGCCGTATACCGGATCGCAGCGGTAAGTTTTTGTTGTGTATCAATAA
TCTTTCCCGAGATCGTCTGTTGTCATTCCTGCCAAATGGCCTGAATTTTATACCGCTGACCCTGTTTGTGGCGTTTATCC
TGCGGGATCAACTGGCCTGGGATTTGCGTCTTGGTTTTGCTCCGGAGCAGGCGGGGGGCATGGTCCTGGGGCGGGCACAA
AACTCCCTGTTGGGATGGACCAGTTTTATCGGGCAGCCGGAGCCAGAATCCGGCGTCATTATCAATGTCAGGTCGTAA

Protein sequence :
MAGKDRSAHADIGQDTVFSDACSYNFFALMESLYRHTGHRSVVSLDTEPEDEIAHFVADASLVFPKSDVVSLTKKENGQY
AITVSFSGLHGSQSPLPGYYLDELALEVAQEEEGLAGFLDLFAHRWTQFLYHIWRKYRYYVCFRNGGVDDFSRRMYALVG
LGSESLRDQLAINHSKMLAYAGTLASPGRSPEVICSLISHCFDLPDVSLEGWQLRQVDITPERQNRLGIRTARTGKKFIE
KSVLGSNFTLGSRIPDRSGKFLLCINNLSRDRLLSFLPNGLNFIPLTLFVAFILRDQLAWDLRLGFAPEQAGGMVLGRAQ
NSLLGWTSFIGQPEPESGVIINVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-105 60
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 2e-105 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_1972 YP_002383101.1 hypothetical protein VFG2079 Protein 8e-59 42