Gene Information

Name : EFER_1969 (EFER_1969)
Accession : YP_002383098.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 2019594 - 2021051 bp
Length : 1458 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
GTGGAAACAGATAGAGCCGGTGGATGGCGTCGGCCACAACTACCGCCTGCTGGTACATGTACGACAGGGCAGTATCGAAA
TGAAAAAAGAGGACAACTGATAATGGCGACCATTAAAAATAAGGTGATCTGGCAGGAGGGGCTATTTGTTCAGCCACAGC
ATTTTCAGCAACAGCAACGTTATAACGATTATATCCTTGGTAATCGCCTGAATGCTCAGAGTGACTTTTTCTGGGGATTC
ACCCGGTTGTCTCTCAATATCGACTTATTGAGCCAGGGTAAAATTCATATTGATCATGCTGAAGGCTGTATGCCGGACGG
CACGGTTTTCAGCATTCCTGATCAGGATTTACTGCCAGAGCCATTAGAACCAAAGGTACTGAATACACCTGAAAGCCACA
TCATTTATCTGGCCTTGCCCGTTATTAGTGATGTTATTAATGAAGTGGATGGCCACCACAGCGCCGGGCAGAGTTCCCGA
CGTTATCGTCTTAACTATGCCGATGTACGCGATTTACACACCGATGAAGGGGATGTCAGGCAACTGTTGCTGGCGCAGCT
TACCCCCAGGATTGTCGGCGGTGGTGAGGATCGGAGCGGTATGGTCACGCTGCCTTTGTGCCGTATCCGCGATAGGTTGG
CTAATGGCGCACTGGTGCTGGATGAAAACTTTATTCCCACCTGCCAGTCTGTTCGCGTTAGCAACACGCTGGGTCGGTTT
GCCGGAGAGATTCAGGGGCTGGTCGCCAGCCGGGCAATTGAACTGGCAAGTCGTATTGGTTCGCCGGAACAAAGCGGCAT
TGCCGATGTGGCCGAGTTTATGATGTTGCAGATCCTCAACCGTAACCAGATGCACTTCACTCACCGCTCACACCTGCACA
CCCTGCATCCGGAGGATTTTTATCTGGATCTGGTGAAATTACTGGGCGAACTGATGACTTTCACTGAGAACAGTCGTTTG
CCCTGTCCTGTGGAGCCTTACGATCACCACGATCTCACCTTGTCGTTTAATACAGTGATCCCGGAATTACGCAGGACGCT
TAATATCGTGCTGATGCCACGGGCTCAAAACCTGCCATTGCGCTTTATGGACGGAATTTATACCGCCACTGTTAACGATC
CGACGTTGTTGCAGTCTGCTTCCTTTGTGCTGGCTGTCCGGGCGCGAATGCCGCATAACCAGATTATTCTCCAGTTTACC
CAGCAGTCGAAAGTTGCCGCCAGCAATAAAATTCGCGATGTGGTCAGCGTACAGGTTCCGGGTATTCCGCTGGTTCCACG
GACCGCAGCACCGCGTCAGTTGCCATACCATGAAGGTTTTGTTTATTTCGACCTGGATAAAGGTGCATCAGCCTGGCAGG
ACGTGGTGAAAGCCGGTGCGCTGTCACTGCATATTTCCGGCACCTTCCCGGAGCTGGACATGCAACTGTGGGCGATAAGG
GGCCAGGCTCATGAGTGA

Protein sequence :
METDRAGGWRRPQLPPAGTCTTGQYRNEKRGQLIMATIKNKVIWQEGLFVQPQHFQQQQRYNDYILGNRLNAQSDFFWGF
TRLSLNIDLLSQGKIHIDHAEGCMPDGTVFSIPDQDLLPEPLEPKVLNTPESHIIYLALPVISDVINEVDGHHSAGQSSR
RYRLNYADVRDLHTDEGDVRQLLLAQLTPRIVGGGEDRSGMVTLPLCRIRDRLANGALVLDENFIPTCQSVRVSNTLGRF
AGEIQGLVASRAIELASRIGSPEQSGIADVAEFMMLQILNRNQMHFTHRSHLHTLHPEDFYLDLVKLLGELMTFTENSRL
PCPVEPYDHHDLTLSFNTVIPELRRTLNIVLMPRAQNLPLRFMDGIYTATVNDPTLLQSASFVLAVRARMPHNQIILQFT
QQSKVAASNKIRDVVSVQVPGIPLVPRTAAPRQLPYHEGFVYFDLDKGASAWQDVVKAGALSLHISGTFPELDMQLWAIR
GQAHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-152 73
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 4e-152 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_1969 YP_002383098.1 hypothetical protein VFG2082 Protein 4e-84 43