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Name : EFER_1967 (EFER_1967) Accession : YP_002383096.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : ATP-dependent Clp proteinase ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2016057 - 2018783 bp Length : 2727 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor DNA sequence : ATGATTCAGATTGATTTAGCTGCACTGGTTAAGCGCCTTAACCCGTTCACCAAACAGGCGCTGGAAATGGCGGCTTCAGA ATGCATGAGCCAGCAGTCGGCAGAAATTACCGTCAGCCATGTGCTTATTCAGATGCTCGCCATACCGCGAAGCGATCTGC GGGTTATTACAGAGCAGGTGGACATTACCGTGGACACGCTACGCCAGTCGTTAACAGAGGAGCGCTATGCCACTGTACGA ATGGCAGACGGCTACCCGGCATTTTCTCCGATGCTGGTTGAATGGCTGAAAGAGGGCTGGCTGCTGGCCTCCGCAGAGAT GCAGCACAACGAACTGCGTGGCGGTGTACTGTTGCTGGCGCTTCTGCACTCGCCGTTGCGTTATGTTCCGCCCGCCGTTG CCCGACTGCTGACCGGCATTAACCGCGACCGCCTGCAACAGGATTTTGCGCAGTGGACGCGCGAGTCAGCAGAAACCGCG ATGCGGAATGCTGACGGTCAGACCATGAATACGATGGTGGATACAGGGGACAGCCTGCTTGCCCGCTACGCCAAAAACAT GACCGCAGACGCCCGTAACGGCAGGCTTGACCCGGTACTGTGCCGCGACCACGAAATCGACCTGATGCTCGACATTCTCT GCCGCCGCCGTAAAAACAATCCGGTAGTGGTGGGTGAAGCAGGCGTGGGTAAAAGCGCGCTGATTGAAGGGCTGGCGCTG CGCATCGTGGCAGGCCAGGTGCCGGACAAGCTGAAAAACACCGATATCATGACCCTTGACCTGGGTGCATTACAGGCCGG GGCATCGGTGAAGGGCGAATTCGAAAAACGCTTCAAGGGGCTGATGGCGGAGGTTATTTCCTCCCCGGTGCCGGTCATTC TGTTTATCGACGAAGCACATACCCTGATTGGCGCGGGCAACCAGCAGGGTGGGCTGGATATCTCCAACCTGCTGAAACCA GCGCTGGCGCGCGGCGAACTGAAAACCATCGCCGCCACCACATGGAGCGAATACAAAAAATACTTCGAGAAAGACGCCGC CCTGTCGCGCCGCTTCCAGTTGGTGAAGGTCAGCGAACCCAACGCCGCCGAAGCCACCATTATTCTGCGCGGTCTGTCGG CGGTCTATGAACAGTCTCACGGCGTGCTGATTGATGATGACGCCTTGCAGGCCGCTGCGACATTAAGTGAGCGTTATCTC TCCGGGCGTCAGTTGCCGGACAAAGCCATTGATGTGCTGGATACCGCCTGCGCCCGCGTGGCCATCAACCTGTCATCGCC GCCGAAGCAAATCTCGGTGCTGACCACTCTGAGCCACCAGCAGGAGGCGGAAATTCGCCAGCTTGAGCGCGAGCTTCGCA TCGGGCTGCGTACCGACACCTCACGGATGACCGAGGTACTGGTGCAGTATGATGAAACACTGGCGGCGCTGGATGAACTG GAAGCGGCCTGGCACCAGCAGCAGACGCTGGTACGGGAAATTATCGCGCTGCGCCAGCAGTTACTGGGCGTGGATGCCAT GGAGGATACGCCGTCAGAGTCAGAACAGGATAATACCGATGCTGAATCGACTGATGATGCTGGCAGCACACAGCCTGAAG AGACCGCTGAAACAGTTTCCCCGGTGCAGAGGCTGACCCAGCTCACCGCCGAACTGGACACCCTGCATAACGACCGGTTG CTGGTTTCCCCGCATGTCGATAAAAAACAGATTGCGGCGGTGATTGCCGAATGGACTGGCGTTCCGCTTAACCGCCTGTC GCAGAATGAAATGTCGGTCATCACCGACCTGCCGAAGTGGCTTGGTGACACCATCAAAGGACAGGACCTGGCGATTGCCA GCCTGCATAAACACCTGCTGACTGCACGCGCCGACCTGCGCCGTCCGGGACGCCCGCTGGGCGCGTTCCTGCTGGCCGGC CCCAGCGGCGTGGGTAAAACCGAAACCGTCCTGCAACTGGCAGAACTGCTCTACGGCGGTCGCCAGTATCTGACCACCAT CAATATGTCCGAGTTCCAGGAGAAGCACACCGTCTCGCGGCTGATTGGTTCCCCTCCGGGCTATGTCGGGTATGGTGAAG GCGGCGTGCTGACCGAAGCGATTCGCCAGAAACCTTATTCTGTGGTGTTGCTCGACGAAGTGGAAAAAGCGCACCCGGAT GTGCTTAACCTGTTCTACCAGGCGTTCGACAAGGGCGAGATGGCAGACGGCGAAGGCCGCCTGATTGACTGTAAAAACAT CGTCTTCTTCCTCACCTCCAACCTCGGCTATCAGGTGATTGTCGAACACGCCGGTGACCCAGAAACCATGCAGGAAGCCC TGTATCCGGTGCTGGCGGACTTCTTTAAACCTGCCCTGCTGGCGCGTATGGAAGTGGTGCCGTACCTGCCGCTGTCGAAA GAGACGCTCGCCACCATCATTGCCGGGAAACTCACCCGTCTGGATAACGTGCTGCGCAGCCGCTTTGGTGCAGAAGTGAT TATTGAACCGGAAGTAACGGACGAAATCATGAGCCGCGTCACCCGCGCGGAAAACGGCGCGAGGATGCTCGAATCGGTCA TCGACGGCGACATGCTGCCGCCGCTCTCCCTGCTGCTGTTGCAGAAAATGGCGGCCAACACGGCGATTGCCCGGATTCGT CTGTCGGCGGCAGACGGTGCATTCACGGCAGACGTGGAAGATGCTCAGAACGACGAGTCCGTCACAGAGGATGAAGCTGT TTTATGA Protein sequence : MIQIDLAALVKRLNPFTKQALEMAASECMSQQSAEITVSHVLIQMLAIPRSDLRVITEQVDITVDTLRQSLTEERYATVR MADGYPAFSPMLVEWLKEGWLLASAEMQHNELRGGVLLLALLHSPLRYVPPAVARLLTGINRDRLQQDFAQWTRESAETA MRNADGQTMNTMVDTGDSLLARYAKNMTADARNGRLDPVLCRDHEIDLMLDILCRRRKNNPVVVGEAGVGKSALIEGLAL RIVAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKP ALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDDALQAAATLSERYL SGRQLPDKAIDVLDTACARVAINLSSPPKQISVLTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLVQYDETLAALDEL EAAWHQQQTLVREIIALRQQLLGVDAMEDTPSESEQDNTDAESTDDAGSTQPEETAETVSPVQRLTQLTAELDTLHNDRL LVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPKWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAG PSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPD VLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHAGDPETMQEALYPVLADFFKPALLARMEVVPYLPLSK ETLATIIAGKLTRLDNVLRSRFGAEVIIEPEVTDEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIARIR LSAADGAFTADVEDAQNDESVTEDEAVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 90 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 90 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-122 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EFER_1967 | YP_002383096.1 | ATP-dependent Clp proteinase ATP-binding subunit | VFG2084 | Protein | 0.0 | 58 |
| EFER_1967 | YP_002383096.1 | ATP-dependent Clp proteinase ATP-binding subunit | VFG2076 | Protein | 1e-135 | 42 |
