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Name : umuD (EFER_1920) Accession : YP_002383051.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuD Function : - COG functional category : K : Transcription COG ID : COG1974 EC number : 3.4.21.- Position : 1974493 - 1974912 bp Length : 420 bp Strand : - Note : binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization DNA sequence : ATGTTGTTTATCAAGCCTGCGGAACTTCGTGAAATCATTACACTTCCTTTGTTTAGTGACCTTGTGCCGTGTGGTTTTCC ATCACCGGCAGCTGACTACGTTGAGCAGCGAATCGATCTTAACCAGTTAGTGATTCAACATCCCAGCGCGACCTATTTTG TTAAAGCAGCGGGAGATTCAATGATTGAGGCCGGGATTGGCGATGGCGATCTGCTAGTGGTTGACAGCGCCATTACTGCC AGCCACGGCGATATTGTTATTGCTGCCGTGGACGGTGAGTTCACCGTCAAAAGATTGCAACTGCGCCCCTCTGTACAGCT TGTGCCGATGAACAGTTCTTATTCGCCCATTACTCTTGGCAGCGAAGAATCGCTGAACGTATTTGGGGTAGTCACGCATG TGGTGAAGGCCGTACGCTGA Protein sequence : MLFIKPAELREIITLPLFSDLVPCGFPSPAADYVEQRIDLNQLVIQHPSATYFVKAAGDSMIEAGIGDGDLLVVDSAITA SHGDIVIAAVDGEFTVKRLQLRPSVQLVPMNSSYSPITLGSEESLNVFGVVTHVVKAVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t06650 | YP_006892470.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-26 | 55 |
| unnamed | ABR13390.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-19 | 50 |
| rulA | CAI36138.1 | SOS-response transcriptional repressor | Not tested | PPHGI-1 | Protein | 4e-17 | 43 |
