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Name : ydbK (EFER_1622) Accession : YP_002382765.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : 2-oxoacid-flavodoxin Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 1666984 - 1670508 bp Length : 3525 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 9025293; Product type pe : enzyme DNA sequence : ATGATCACAATTGACGGTAATGGCGCGGTAGCTTCGGTGGCGTTTCGCACCAGTGAAGTTATCGCCATCTACCCTATTAC CCCCAGTTCCACGATGGCAGAACAGGCTGATGCATGGGCCGGAAACGGCTTGAAAAACGTTTGGGGAGACACACCACGCG TGGTTGAAATGCAGTCGGAAGCGGGTGCTATCGCTACCGTGCATGGTGCTTTGCAAACTGGCGCCCTCTCAACATCGTTT ACGTCATCGCAGGGTTTGCTGCTGATGATCCCAACGCTGTACAAACTGGCAGGCGAACTGACGCCGTTTGTCCTGCATGT TGCGGCACGTACCGTTGCCACACATGCACTCTCTATTTTTGGCGATCATTCCGACGTCATGGCGGTGCGCCAGACGGGTT GCGCGATGTTGTGTGCAGCAAACGTCCAGGAGGCGCAAGACTTTGCTCTCATTTCGCACATTGCGACACTTAAAAGTCGC GTGCCATTTATTCATTTCTTTGATGGTTTCCGCACCTCCCACGAGATCAATAAAATTGTCCCGCTGGCCGATGACACTAT TCTTGAACTGATGCCGCAGGCAGAAATTGATGCTCATCGCGCCCGTGCACTCAACCCGGAACATCCGGTGATCCGCGGCA CGTCCGCCAATCCTGACACTTATTTCCAGTCTCGCGAAGCCACCAACCCATGGTACAACGCAGTCTATGACCATGTTGAA CAGGCGATGAATGATTTCGCTGCCGCGACAGGTCGCCAGTATCAGCCGTTTGAGTATTACGGGCATCCACAAGCGGAACG GGTGATTATCCTGATGGGCTCTGCCATCGGCACCTGTGAAGAAGTGGTTGATGAATTGCTGACCCGTGGCGAAAAAGTCG GCGTGCTGAAAGTTCGCCTGTACCGCCCCTTCTCCGCCAAACACTTACTGCAAGCATTGCCGGACTCTGTTCGGATAGTG GCGGTGCTGGATCGCACCAAAGAGCCAGGTGCGCAAGCGGAACCCCTGTACCTGGATGTGATGACCGCACTGGCAGAAGC CTTTAATAATGGCGAGCGTGAAACCCTGCCCCGTGTCATTGGTGGGCGCTATGGTCTTTCATCCAAAGAATTTGGCCCGG ACTGTGTACTGGCGGTATTTGCCGAGCTCAACGCAGCTAAACCGAAAGCGCGCTTTACGGTTGGTATTTACGATGATGTG ACCAATCTGTCACTGCCGTTGCCGGAAAACACCCTGCCAAACTCGGCGAAACTGGAAGCCTTGTTTTATGGTCTTGGTAG TGATGGCAGCGTTTCCGCGACCAAAAACAATATCAAGATTATCGGTAATTCCACGCCGTGGTACGCACAGGGCTATTTTG TTTACGACTCCAAAAAGGCGGGCGGCCTGACGGTTTCTCACCTTCGCGTGAGCGAGCAGCCGATTCGCTCCGCTTATCTC ATTTCCCAGGCTGATTTTGTTGGCTGCCACCAGTTGCAGTTTATCGACAAATATCAGATGGCTGAACGTTTAAAACCTGG CGGCATTTTCCTGCTCAACACGCCGTACAGCGCAGATGAAGTATGGTCGCGCTTGCCGCAGGAAGTTCAGGCGGTGCTAA ATCAGAAAAAAGCGCGCTTCTATGTGATTAACGCGGCGAAAATTGCCCGCGAATGTGGCCTGGCGGCCCGTATTAATACT GTCATGCAGATGGCATTTTTCCATTTGACACAAATTCTGCCTGGCGATAGCGCCCTGGCCGAATTGCAGGGCGCGATTGC CAAAAGCTACAGCAGCAAAGGCCAGGATCTGGTGGAACGCAACTGGCAGGCTCTGGCGCTGGCGCGTGAATCGGTAGAAG AAATTCCGTTGCAACCGGTAAATCCGCACAGTGCCAATCGACCGCCAGTGGTTTCCGATGCTGCTCCTGATTTCGTGAAA ACCGTTACCGCTGCAATGCTCGCTGGGCTTGGCGATGCTCTCCCTGTTTCGGCGCTGCCACCAGATGGCACCTGGCCGAT GGGCACCACACGCTGGGAAAAACGCAATATTGCCGAAGAGATCCCCATCTGGAAAGAGGAACTCTGTACTCAATGTAACC ACTGCGTCGCCGCTTGCCCACACTCAGCTATTCGCGCCAAAGTGGTGCCGCCTGAAGCAATGGAAAATGCCCCTGCCAGC CTGCATTCGCTGGATGTAAAATCGCGTGATATGCGCGGGCAGAAATATGTCTTGCAGGTAGCTCCGGAAGATTGCACCGG CTGTAACCTGTGCGTCGAAGTTTGCCCGGCGAAAGACCGTCAGAATCCAGAGATTAAAGCCATCAATATGATGTCGCGCC TGGAACATGTCGAGGAAGAGAAAATCAATTACGATTACTTCCTCAACCTACCAGAAATCGATCGCAGCAAACTGGAACGT ATTGATATTCGTACATCGCAACTGATTACACCGCTGTTTGAATATTCAGGTGCTTGCTCCGGTTGTGGCGAGACGCCGTA TATTAAATTGCTGACTCAGCTCTATGGCGACCGGATGTTGATCGCTAACGCTACGGGTTGTTCTTCAATTTATGGCGGTA ACCTGCCCTCTACACCGTATACTACCGATGCCAACGGTCGTGGACCGGCATGGGCGAACTCGCTGTTTGAAGATAACGCC GAATTTGGCCTTGGTTTCCGCCTGACGGTCGATCAACACCGTGTCCGCGTGCTGCGTCTGCTTGATCAATTTGCCGATAA AATCCCGGCTAAATTACTAACTGCGTTGAAATCAGACGCCACACCAGAGGTTCGTCGTGAACAGGTTGCAGCTTTACGCC AGCAACTCAACGATGTTGCCGAAGCACATGAACTGCTACGTGATGCAGATGCACTGGTGGAAAAATCAATCTGGCTGATT GGTGGCGATGGCTGGGCTTACGATATCGGCTTTGGCGGTCTGGATCATGTATTGAGTTTGACGGAAAACGTCAACATTCT GGTGCTGGATACGCAATGCTATTCCAACACCGGTGGTCAGGCGTCGAAAGCGACACCGCTGGGTGCAGTAACTAAATTTG GCGAGCACGGCAAACGTAAAGCGCGTAAAGATCTTGGCGTCAGTATGATGATGTACGGTCATGTTTATGTGGCGCAGATT TCTCTTGGCGCACAGCTCAACCAGACAGTGAAAGCGATTCAGGAAGCGGAAGCGTATCCGGGGCCATCGCTGATCATCGC TTACAGCCCGTGTGAAGAGCATGGTTACGATCTGGCACTCAGTCACGACCAGATGCGCCAACTCACTGCCACTGGCTTCT GGCCGCTATATCGCTTTGATCCGCGTCGTGCCGAAGAAGGAAAACTGCCGCTGGCGCTGGATTCACGCCCGCCGTCAGAG GCACTGGAAGAAACGTTACTTCACGAGCAGCGTTTCCGTCGTCTGAATTCGCAGCAACCAGAAGTGGCAGAACAGTTATG GAAAGATGCTGCAGCTGATTTGCAAAAACGCTATGACTTCCTGGCACAAATGGCCGGAAAAGCGGAAAAAAGCAGTTCAG AGTAA Protein sequence : MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSF TSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR VPFIHFFDGFRTSHEINKIVPLADDTILELMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE QAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPDSVRIV AVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDV TNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINT VMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEIPLQPVNPHSANRPPVVSDAAPDFVK TVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDYFLNLPEIDRSKLER IDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNA EFGLGFRLTVDQHRVRVLRLLDQFADKIPAKLLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQI SLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRAEEGKLPLALDSRPPSE ALEETLLHEQRFRRLNSQQPEVAEQLWKDAAADLQKRYDFLAQMAGKAEKSSSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 47 |
