Gene Information

Name : ecpD (EFER_0163)
Accession : YP_002381387.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : chaperone protein EcpD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 177463 - 178203 bp
Length : 741 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 93352405, 8102362, 15561151; Product type f : factor

DNA sequence : 
ATGTTTTTCAACACTAAACATACAGCAGCATTATGCTTCGCAACCTGTGTAGCTTTTAGCTCATCAGCTATAGCAGATAT
CGTAATTTCCGGTACACGCGTAATCTATAAAAGCGACCAAAAAAGTGTCAGCGTTCGTCTGGAAAATAAAGGCAATAACC
CATTACTTGTTCAAAGTTGGCTGGATACCGGCGATGACAATGCTGAGCCTGGCAGTATTACCGTACCCTTTACTGCGACT
CCGCCCGTATCACGCATTGATGCAAAACGCGGCCAAACTATCAAACTGATGTACACCGCCAGCAGCGTCCTGCCAAAAGA
CAGAGAAAGTGTGTTCTGGTTTAACGTACTGGAAGTTCCTCCAAAACCAGATGCCGCAACAACTACAAATCAAAGCCTGC
TGCAGTTGGCATTTCGTACCCGTATCAAATTGTTTTATCGTCCTGAAGGGTTAAAAGGCAATCCGTCTGACGCGCCGTTA
GCACTTAAATGGACATGGGCAACTGCGGGAGGCCAAACAGCTTTGCGAGTAGCAAACCCTACGCCTTATTACGTCTCTTT
TAGCAGTGGTGATCTAGAAACCAGTGGCAAGCGCTATCCACTCGACGTGAAGATGATTGCGCCATTCAGTAACGATGTCA
TCAAGGTGAATGGTATGAGTGGCAAATCAAGCTCTGCAAAAGTTCATTTCTACGCCATTAATGATTTTGGTGGCGCAATT
GAAGGCAATGCAACCCTGTAG

Protein sequence : 
MFFNTKHTAALCFATCVAFSSSAIADIVISGTRVIYKSDQKSVSVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTAT
PPVSRIDAKRGQTIKLMYTASSVLPKDRESVFWFNVLEVPPKPDAATTTNQSLLQLAFRTRIKLFYRPEGLKGNPSDAPL
ALKWTWATAGGQTALRVANPTPYYVSFSSGDLETSGKRYPLDVKMIAPFSNDVIKVNGMSGKSSSAKVHFYAINDFGGAI
EGNATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 3e-63 58
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 1e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ecpD YP_002381387.1 chaperone protein EcpD VFG0007 Protein 2e-41 43
ecpD YP_002381387.1 chaperone protein EcpD VFG1468 Protein 7e-42 43
ecpD YP_002381387.1 chaperone protein EcpD VFG1145 Protein 5e-39 42