|
Name : EFER_1529 (EFER_1529) Accession : YP_002382675.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1562519 - 1563802 bp Length : 1284 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGAATCCGACTATTGGTCTGTTTGTGATTTTCTTTGTTTCACTTATGCTGGGTGTGCCGGTTATTTTCTCCCTGGCGTT ATCTTCAATCTTCTATTTACTGGTTACCGATATGGGACTCGCTATTATGGCGAATCAGTTCTTTAGCGGTATGGACTCTT TTGTACTGCTCTGTATCCCCGGCTTTCTGCTGGCTGGCGGGTTAATGAACGGTGGCGGCATAACTGATCGTATTGTTTCT TTCAGTAATGCCTGGCTTGGTCATATACGTGGCGGCCTGGCAATGGCCAACGTAAGTGGTTCAATGATTTTTGCCGGAAT TTCAGGCACAGCGGTATCGGAAGCCGCAAGTATCGGTTCGGTTATGATCCCAGCCATGAAACGCAGTGGGTACGACGCAC CGTTTTCGGGGGCAATTACGGCTGTAGCCTCGACGGTTGGACCGATCATCCCTCCCAGCGTACCAATGATTATCGTCGGC ACGTTAACGGGGTTGTCCGTGGGTAAACTGTTTATCGCGGGGGCTGTACCCGGTTTACTGATGGGCGCAACGATGGCGGG TATTGCGTGGTATCTGGCACGTAAACGTGGGTATCCAAAGGGGGAGAAGGCATCATTCCGTGAGCGTCTGCGCGCAACCC GTGGTGCTATTTGGGCAATCCTGATGCCGGTTATGATCATCGGTGGCCTGGTCACTGGACTGTTTACACCGACAGAAGCA TCTGTATTTGCAGTGGTTTTCGCGCTGATCGTCGGCTTTTTCGTCTATGGCGATCTGACCGTGAATAAATTCATGGGCTG CATGATGGAAAGTATCAGCGGTACGGCAGGTATCCTGATGCTGGTGGGGTTCGCTAACGTTTTTGCCTGGATCCTGACTT CAGAAGGGATTCCACAGCAAATTGCAGATGGCATGTTATCCATTACTGATAACAAGTATGTGTTAATTCTGATGATTAAC CTGCTGCTGTTGTTAGTCGGGATGTTTATGGAAACCATCGCCGCGTTACTTATTCTGTTTACTCCTTTACTTTCTGTCGC TACCGCCATCGGTATGGACCCAATCCACTTCGCAGTAATGATGGTAATGAACCTGGTTATCGGCTTAACGACGCCGCCAG TCGGTGTGTGCCTTTTCGTCTCACAGGGTATTGCTCGTGTCTCCTTAGGGGAGATCAGTAGAGCGGTTATTCCGTTCATT ACCGGAAATATCATTTTGCTCTTTATGGTTTCTTATATTCCAGGTCTTTCGCTGTGGCTCCCGGCGCTGTTAGGTATGAA ATAA Protein sequence : MNPTIGLFVIFFVSLMLGVPVIFSLALSSIFYLLVTDMGLAIMANQFFSGMDSFVLLCIPGFLLAGGLMNGGGITDRIVS FSNAWLGHIRGGLAMANVSGSMIFAGISGTAVSEAASIGSVMIPAMKRSGYDAPFSGAITAVASTVGPIIPPSVPMIIVG TLTGLSVGKLFIAGAVPGLLMGATMAGIAWYLARKRGYPKGEKASFRERLRATRGAIWAILMPVMIIGGLVTGLFTPTEA SVFAVVFALIVGFFVYGDLTVNKFMGCMMESISGTAGILMLVGFANVFAWILTSEGIPQQIADGMLSITDNKYVLILMIN LLLLLVGMFMETIAALLILFTPLLSVATAIGMDPIHFAVMMVMNLVIGLTTPPVGVCLFVSQGIARVSLGEISRAVIPFI TGNIILLFMVSYIPGLSLWLPALLGMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-59 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-59 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 1e-59 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EFER_1529 | YP_002382675.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 8e-60 | 42 |
