|
Name : hofB (EFER_0127) Accession : YP_002381353.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 137569 - 138954 bp Length : 1386 bp Strand : - Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : ATGAATAACGCACAACTTACTGCGCTCTGCCAACGTTACCAGGGCATCTTGTTAGATAGTGATCAAGAAGTGATTAACGT TGCCGTTGTGGATGCCCCTTCCCATGAGTTGCTGGACGCTCTGCATTTTGCAACACAAAAACGGATCAACATTGTCTGTT GGACACGCCAACAAATGGAAAGCCACCAGCATCAACCGCAGCAAACACTTCCTGCCGTGGTTTCGCCTGGTCATCTGACG GCGGCAGAGCTACTCAATCAAACATTGCATTCGGCACTGGCTAAACGAGCTTCTGACATTCATGTCGAACCAGCGGAAAG TTGTTACCGTATTCGACTACGTATAGATGGCGTTCTTCACGCGCTTCCTGATGTCGCAAAAGAGACGGGAACCGCATTGA CAGCAAGACTGAAAGTTCTGGGTAATCTCGATATCGCGGAACACCGCCTGCCGCAAGATGGCCAATTTACTGTTGATTTG GCGGGGAATGCTGTCTCTTTTCGAATTGCTACTCTGCCTTGTCGTGGCGGTGAAAAAGTGGTGTTACGCCTTCTGCATCA GGTCGAACAAGCACTGGATATTCACCAACTGGGGATGCAACAAAACCAGCTGGAGCCCTTTATTCAGGCACTGCAACAAC CTCAGGGGCTGATACTGGTGACCGGCCCAACGGGTAGCGGTAAAACTGTCACGTTGTATAGCGCACTGCAAACGCGAAAT ACGCCACAAAGCAATCTCTGTAGCGTGGAAGATCCTGTTGAGATCCCCATTGACGGATTAAATCAGACACAAATTCACCC ACGCGCCGGGCTAACCTTTCAGGGAGTATTACGGGCACTTCTTCGCCAGGATCCTGATGTCATCATGGTGGGGGAAATTC GTGATGGTGAAACAGCAGAAATAGCCATTAAAGCTGCGCAAACCGGGCATCTGGTGCTTTCAACACTGCATACCAACTCC ACCAGTGAAACTTTGGTGCGGTTGCAACAAATGGGCGTAGCCCACTGGATGTTGTCTTCAGCACTGACACTGGTTGTGGC CCAACGCCTGGTCAGAAAACTTTGTCCGCATTGCCGTCATATTCATGGCGAGTCAATCACACTTCCTGAGAATTTATGGT CAACACCACTTCCTCGTTGGCAGGCTCTGGGTTGCAAACACTGCAATCAGGGATTCTACGGTCGAGTTGCGCTGTTTGAA GTTCTTCCCATCACACCATCGTTACGCCAGTTGATCGCTAACGGTAGTGGTGTGGCAGAACTGGAAACACACGCACAACA GGAAGGTATCCAGCCGCTTTTTGCTAATGGCTGCCAGGCTGTTGAGCAAGGGTTAACCACGTTTGAAGAGCTCATTCGCG TGTTGGGAATACCTCATGGCCACTAA Protein sequence : MNNAQLTALCQRYQGILLDSDQEVINVAVVDAPSHELLDALHFATQKRINIVCWTRQQMESHQHQPQQTLPAVVSPGHLT AAELLNQTLHSALAKRASDIHVEPAESCYRIRLRIDGVLHALPDVAKETGTALTARLKVLGNLDIAEHRLPQDGQFTVDL AGNAVSFRIATLPCRGGEKVVLRLLHQVEQALDIHQLGMQQNQLEPFIQALQQPQGLILVTGPTGSGKTVTLYSALQTRN TPQSNLCSVEDPVEIPIDGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMVGEIRDGETAEIAIKAAQTGHLVLSTLHTNS TSETLVRLQQMGVAHWMLSSALTLVVAQRLVRKLCPHCRHIHGESITLPENLWSTPLPRWQALGCKHCNQGFYGRVALFE VLPITPSLRQLIANGSGVAELETHAQQEGIQPLFANGCQAVEQGLTTFEELIRVLGIPHGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-71 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-71 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_002381353.1 | hypothetical protein | VFG2426 | Protein | 3e-73 | 47 |
| hofB | YP_002381353.1 | hypothetical protein | VFG2048 | Protein | 7e-73 | 47 |
| hofB | YP_002381353.1 | hypothetical protein | VFG0182 | Protein | 3e-70 | 44 |
