Gene Information

Name : PCC7424_5746 (PCC7424_5746)
Accession : YP_002381041.1
Strain :
Genome accession: NC_011738
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 133097 - 133891 bp
Length : 795 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: syp:SYNPCC7002_G0086 ATP-binding protein of ABC transporter for iron compound

DNA sequence :
ATGAATCAATTAGAAGCACAAAACTTAACTTTAACTTATGAAAAAACTATTATTGTTCGGGATTTAAATTTAAGTATTCC
AACTGGAAAAATTTCAATTTTAGTTGGAGCAAATGGTTGTGGAAAATCTACTCTTTTACGAGGATTAGGCAATTTACTTA
AACCCCATTCTGGCACGGTTTATCTGGATGGAAAAGCGATTACTAAATTACCCAATAAATGGGTCGCTCAAAAGTTAGGA
ATTTTACCCCAAAATCCTCTCGCACCAGAAGGGTTAACCGTTCGAGAATTAATCGCTCAAGGGCGTTATCCTTATCAAAA
CTGGTGGCAACAATGGTCAGTAGAGGATGAGAAATTTGTTCAAAAAGCTTTGGCTACTGTTAATCTGATTGAGTTTGCCG
ATCGTCCGTTAGATACTCTTTCAGGAGGACAAAGACAACGAGCGTGGATTGGAATGGTTTTAGCTCAGAATACTGATATT
TTATTATTGGATGAGCCGACTACTTTTTTAGATTTAGCCCATCAAATAGAAGTTTTAGACTTATTATATGAACTGCATCA
TCAAAAAACGTTAACGATTGTTATGGTTTTACACGATCTTAATTTAGCTTGTCGTTACGCCGATCATTTAATTGCTATTC
GTAATCAGCAAATTTATAGTCAAGGGCATCCTCAACAAATTATGACTCAAACAATGGTCAAAGATGTTTTTGGACTAGAT
TGTCAGATTATGATCGATCCGATCGCCTTAACACCGATGTGTATTCCCCTGACCCGAAAATATTCCTCTTCATGA

Protein sequence :
MNQLEAQNLTLTYEKTIIVRDLNLSIPTGKISILVGANGCGKSTLLRGLGNLLKPHSGTVYLDGKAITKLPNKWVAQKLG
ILPQNPLAPEGLTVRELIAQGRYPYQNWWQQWSVEDEKFVQKALATVNLIEFADRPLDTLSGGQRQRAWIGMVLAQNTDI
LLLDEPTTFLDLAHQIEVLDLLYELHHQKTLTIVMVLHDLNLACRYADHLIAIRNQQIYSQGHPQQIMTQTMVKDVFGLD
CQIMIDPIALTPMCIPLTRKYSSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-55 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-63 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-53 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-58 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-58 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-56 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-56 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7424_5746 YP_002381041.1 ABC transporter BAC0164 Protein 8e-56 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7424_5746 YP_002381041.1 ABC transporter VFG0925 Protein 2e-63 50
PCC7424_5746 YP_002381041.1 ABC transporter VFG1042 Protein 8e-56 47