Gene Information

Name : PCC7424_0498 (PCC7424_0498)
Accession : YP_002375831.1
Strain : Cyanothece sp. PCC 7424
Genome accession: NC_011729
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 550726 - 551814 bp
Length : 1089 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mar:MAE_40000 riboflavin biosynthesis protein

DNA sequence :
ATGACTTCCTCTTTTGACCGTGAAATGATGCAGCACTGTATTAATCTGGCTCGCCAAGCAGCCGGCAAAACCTCCCCTAA
TCCGATGGTAGGGGCAGTAATTGTCAAAGATGGGCAAGTGATAGGAGAAGGGTTTCACCCAAAAGCCGGACAACCCCATG
CGGAAGTTTTTGCCCTCAAACAGGCAGCAGAGCAAGCCAAGGGAGCAACAATCTATATTAGCTTAGAACCTTGTAATCAT
TATGGGCGTACTCCTCCCTGTACGGAAGCGTTAATTGAAGCGCAAGTCAATAAGGTGGTAATTGGGATGATCGATCCGGA
TCCGCGAGTGTCCGGCAGTGGAGTTAAACGGTTACAAGAGGCAGGAATTGAGGTAGTGGTAGGAGTAGAAGAAGACGCTT
GTCGTCGTTTAAATGAGGGGTTTATTCATCGGGTTTTATCTAAAAAACCCTTTGGGATCTTAAAGTATGCTATGACTCTC
GATGGTAAAATTGCCACAACCTCCGGTCATAGTGCTTGGATCACTGGGGAAGCTTCCCGTCGTCTCGTTCATCACCTGAG
AGCCTCTTGTGATGCGGTTATTATTGGAGGTAATACAGTCCGTCAAGATAATCCTCATTTAACGAGTCATGGGGTATCCT
CTCATAATCCTTTAAGAGTGGTGATGAGTCGGAGTTTAAATTTACCGCTTGAGGCGCATTTGTGGGAAACCAGTCAAGTT
CCGACTTTAGTCTTTACCCAAGAAGGCATGAACCCGGCGTTGCAAAAACAGTTGTTAAAGCGTCAGGTAGAGGTGATTGA
ATTGAAATCTTTATCCCCGTCTGAAGTGATGCACCATTTATATGAACGGGGGTTTTCTTCGGTATTGTGGGAATGTGGCG
GCATTTTAGCAGCACGGGCGATCGCTGAGGGAATGGTACAAAAAGTGATGGCCTTTATTGCTCCTAAAATTATTGGCGGA
AATACTGCTCCTTCGCCGGTAGGGGATTTAGGATTAGAAAAAATGACTGAAGCTTTACAATTAGAAAAAGTTACTTTTCA
TCAAATAGAAAATGATTTTGTTATCGAAGGATACTTAATTAATGGATAA

Protein sequence :
MTSSFDREMMQHCINLARQAAGKTSPNPMVGAVIVKDGQVIGEGFHPKAGQPHAEVFALKQAAEQAKGATIYISLEPCNH
YGRTPPCTEALIEAQVNKVVIGMIDPDPRVSGSGVKRLQEAGIEVVVGVEEDACRRLNEGFIHRVLSKKPFGILKYAMTL
DGKIATTSGHSAWITGEASRRLVHHLRASCDAVIIGGNTVRQDNPHLTSHGVSSHNPLRVVMSRSLNLPLEAHLWETSQV
PTLVFTQEGMNPALQKQLLKRQVEVIELKSLSPSEVMHHLYERGFSSVLWECGGILAARAIAEGMVQKVMAFIAPKIIGG
NTAPSPVGDLGLEKMTEALQLEKVTFHQIENDFVIEGYLING

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-47 42
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-47 42