Gene Information

Name : PCC7424_4284 (PCC7424_4284)
Accession : YP_002379521.1
Strain : Cyanothece sp. PCC 7424
Genome accession: NC_011729
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4756854 - 4757537 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mta:Moth_1478 two component transcriptional regulator

DNA sequence : 
ATGCGAATTTTATTAGTTGAAGATGAACCAGGAATTGCTCAATTTATCAATCAAGGGTTAAAAGAAACCGGTTATGGGGT
GGATCTGGCCATAGACGGATTAGAGGGAAAGCGATACATTGAATCGGTAGAGTACGATATTATTATTTTAGACATCATGC
TCCCTAAAATAGACGGTTTAACCTTACTCGGAGAAATTAGAGCGAAAAAAAATGTCACTCCTGTCTTACTCCTAACAGCA
AAAGATAGTATTGAAGACCGGGTAAAAGGATTAAATGGGGGAGCAGATGATTATTTAGTGAAACCCTTCGCTTTTTCGGA
ATTACTCGCCCGAATTAGAGCCTTACAACGTCGTCCCCCTCTACAATTTAGCACCATTTTACAGCTAGAAGACTTAAAGA
TGAATCTAGTGACGCGAGAGGTTAAACGAGGAGATAAAATTATTGATCTGAGTCCTTTAGAATTTAAACTCTTAGAATAT
TTATTACGGAATGCTAATCAGGTATTGACTCGCACTCAAATTGGTGAGCAAGTTTGGGACTTAGATTTTTATACCAATTC
TAATGTAGTCGATGTTTATATTGGCTATCTAAGACGAAAAATCGATCGGGGATTTGACAACCAACTTTTACATACTATTC
GAGGGGTAGGCTATTGTTTAAAACCAGAAGGTAATGAAAATTAA

Protein sequence : 
MRILLVEDEPGIAQFINQGLKETGYGVDLAIDGLEGKRYIESVEYDIIILDIMLPKIDGLTLLGEIRAKKNVTPVLLLTA
KDSIEDRVKGLNGGADDYLVKPFAFSELLARIRALQRRPPLQFSTILQLEDLKMNLVTREVKRGDKIIDLSPLEFKLLEY
LLRNANQVLTRTQIGEQVWDLDFYTNSNVVDVYIGYLRRKIDRGFDNQLLHTIRGVGYCLKPEGNEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-44 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-43 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-50 52
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-51 48
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator BAC0197 Protein 6e-49 48
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-49 47
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-42 47
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator BAC0347 Protein 8e-44 47
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator BAC0308 Protein 3e-46 47
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 3e-33 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 4e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator VFG1390 Protein 7e-48 47
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator VFG0596 Protein 3e-44 46
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator VFG1389 Protein 7e-39 43
PCC7424_4284 YP_002379521.1 winged helix family two component transcriptional regulator VFG1386 Protein 3e-37 41