Gene Information

Name : PCC7424_2552 (PCC7424_2552)
Accession : YP_002377836.1
Strain : Cyanothece sp. PCC 7424
Genome accession: NC_011729
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2827618 - 2828376 bp
Length : 759 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ter:Tery_3219 ABC transporter

DNA sequence : 
ATGCAAGCTAACTCATTGAAACCTCATGCCACTATTGATGTAGTGCATTTAGGGGTGTCTTATCGCAGTGTTCAGGCTTT
ACAGGATATCACCTTAAAAGTGTTATCAGGACGATTAACGGGGGTTATTGGCCCGAATGGGGCGGGAAAAAGTACCTTAA
TTAAAGGTATGTTAGGCTTAATCCCGATTAATCAAGGAATTGTCACTTATCAGGGTCAACCGTTAACCGAACAATTAGGC
CGGGTGGCTTACGTTCCCCAGCGATCGCAGATAGACTGGACTTATCCGGCTACGGTGTGGGATGTGGTGATGATGGGAAG
AATCCGCAAAACGGGCTGGTTTAAGCGATTTTCCTCGATAAGTCGGCGCAAAGCAGCAGAAGGTTTAGAAAGGGTGGGAA
TGGAAGCTTATAAAACTCGTCCCATCGGACAGTTATCGGGAGGACAGCAACAACGGGTATTTTTAGCGAGATCTTTAGCG
CAAGAGGCGGATATATTTTTCTTTGATGAACCGTTTGTCGGGGTTGATCAAAAAACAGAAAATATTATCTTTGATATTTT
TCGGCAGTTAGCGGCAGAGGGAAAAGTCGTTTTAGTGGTTAATCATGATTTAGGGAACTCTATCACTAATTTTGATGATT
TAATTTTGTTAAATAGGGAATTAATTTCTGTGGGGATGAGACAAAAGGTACTTAGAGAAGATAATCTTTATCATGCTTAT
GGGGGTAAAGTGGCCTTTTTTAATGAACAAGCGGCCTAA

Protein sequence : 
MQANSLKPHATIDVVHLGVSYRSVQALQDITLKVLSGRLTGVIGPNGAGKSTLIKGMLGLIPINQGIVTYQGQPLTEQLG
RVAYVPQRSQIDWTYPATVWDVVMMGRIRKTGWFKRFSSISRRKAAEGLERVGMEAYKTRPIGQLSGGQQQRVFLARSLA
QEADIFFFDEPFVGVDQKTENIIFDIFRQLAAEGKVVLVVNHDLGNSITNFDDLILLNRELISVGMRQKVLREDNLYHAY
GGKVAFFNEQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-49 47
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-49 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 7e-45 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7424_2552 YP_002377836.1 ABC transporter BAC0400 Protein 3e-47 46
PCC7424_2552 YP_002377836.1 ABC transporter BAC0350 Protein 3e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7424_2552 YP_002377836.1 ABC transporter VFG0526 Protein 3e-45 41