Gene Information

Name : PCC7424_0011 (PCC7424_0011)
Accession : YP_002375353.1
Strain : Cyanothece sp. PCC 7424
Genome accession: NC_011729
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 11865 - 14243 bp
Length : 2379 bp
Strand : -
Note : PFAM: ATPase AAA; Clp domain protein; ATPase AAA; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: mar:MAE_25950 ATP-dependent Clp protease ATPase

DNA sequence :
ATGTTTGAACACTTTAGTGACAAAGCTGTCAAAGCGATTATGTTTGCCCAGGAGGAAGCCCGACGTACAGGCCACAATGT
GGTCGGGACAGAACATTTATTATTGGGGGTGATCGGGGAAGAAACCTCACTCGCTGCCAGTGTTCTGAGAGATTTGGGCA
TAAATTTACCCCAAACTAGACGTATTATTGAGGATATGACCGGGCGGGGGCCTGGATATAGTCCAGCCAATATCCCCTTT
ACCCCAAAAGTAAAAAGGATTTTTGAAGGCGCATTTCAAGAAGCCCGTCAACTCGGAGATCGAGTCATTACTCCAGTCCA
TTTACTTCTAGCCATAACCACCGAAAAAGAATCTCTAGCAGGTAAAATCCTCACTCAACAGGGAGTAGATCTCAAAAAAC
TCCGCACAGAATTAATTAATAAAAATGCTGAAAAGTCTGCCGCAGGGGCTACCGTCGGCGCGACCAATGAACCTTACCGT
TTTGGAACTCCTGGCGGTCGTCAAGCGAGTTTATCCGAATTTGGCATTAATTTAACTCAACAAGCGGCAGAAGGAAAATT
AGACCCCGTAGTCGGACGCGATCGAGAAGTAGAAAGAACCATTCAAATTTTAGGCCGTCGCACCAAGAATAACCCCGTTT
TAATCGGAGAACCCGGAGTCGGTAAAACCGCGATCGCCGAAGGATTAGCCCAAAGAATTGTACAAGGTGACGTTCCCCCA
TTACTCCACGATAAACAAGTTTTTAGTTTAGATTTAGGATTACTTCTGGCCGGAACTCGATTTAGAGGAGAATTTGAAGA
ACGTCTTAAGGGTATTGTCGAAGAAGTTCGTCAAGCCGGCAATATTATTTTAGTGATTGATGAAATTCATACCCTGGTAG
GGGCTGGCGCGTTAGGCGGTTCTCTCGATGCAGCGAACATGATTAAACCCGCCTTAGCGCGGGGTGAATTGCAATGTTTA
GGCACAACCACCCTTAACGAATACCGTCAATATATCGAAAAGGATGCCGCCCTAGAACGACGTTTTCAACCGGTTAAGGT
GGGCGAACCCTCGATCACAGAAACCATTGAAATTCTGCATGGGTTACGTAAACAATACGAAGATCACCATAAGGTTAAAT
TCTCGGATGCTGCTTTGACCGCCGCCGCTAAACTCAGCGATCGTTATATTAGCGATCGTTTCCTTCCCGATAAGGCGATC
GACTTGATCGATGAGGCCGGTTCGCGGATGCACGTACAATATTCCCAGAAGAAAAAAGCCCACCCAGAAACAGAGGCAGA
AGAATCACCCATTATTAACCCACAGTCTTTAGTACCCGTTGTCGATGAAGAAGAAATTGCTGAAATTGTTTCTTCTTGGA
CAGGTGTACCGGTTAATAAAGTGAATGAAACTGAGTCAGAATCTTTAATTTACCTCGAAGCCCGATTACATGAGCGGATT
ATCGGTCAAAATGAAGCCGTAAGTGCCGTTGCTCGTGCTGTCCGTCGTGCTAGAGTGGGGATGAAAGATCCTAACCGTCC
GATCGCCTCTTTCGTGTTTGCGGGGCCGACGGGAGTAGGGAAAACCGAATTAGCCAAAGCCTTAGCAACCTTCCTCTTTG
GGGCTGCGGATGCGATGATTCGTCTAGATATGTCGGAATTTATGGAACCTCACACGGTTTCTAAATTAATTGGGTCTCCT
CCGGGATATATTGGTTATGACGAAGGGGGACAATTAACCGAAGCAGTACGCCGGAAACCTTACACAGTTATCCTTTTTGA
TGAGATAGAAAAGGCTCATCCGGATGTGTTTAATACCCTGTTGCAATTGTTAGATGATGGTCGTTTAACAGATGCTAAAG
GTCGGACTGTAGACTTTAAAAATACTCTGATCATTATGACTTCTAATATCGGTTCTAAGGTAATCGAAAAAGGAGGCGGT
GGTTTAGGGTTTGCCATTTCCGATGACATCGATGAATCTCAATACAATTATGTCCGCAATTTAGTCACGGAGGAAATGAA
AAATTACTTCCGTCCTGAATTCCTCAACCGTCTTGATGAGATTATTGTCTTCCGTCAATTGACCAAAAATGAAGTTAAAG
AAATTGCTGATATTCTCTTACAAGAAATCGCCATTCAATTAAAAGAACAACGAGATATTAGTCTAGATGTAACAGAACAA
TTTAAAGAATTAGTGGTTAAAGAAGGCTATGATCCGAGTTATGGCGCAAGACCCTTACGTCGGGCAATTATGCGACGTTT
AGAGGATAGTTTAGCAGAAGCGATTTTAGCCGGTCAAGTTCGAGATGGTGACAACATAATTATCGATGCCGATGACCAAG
GTCAGGTCAGAATTTTAAATTCTGAAAAAGCTGTCCTCCATTTACAACCCGTTGGATAA

Protein sequence :
MFEHFSDKAVKAIMFAQEEARRTGHNVVGTEHLLLGVIGEETSLAASVLRDLGINLPQTRRIIEDMTGRGPGYSPANIPF
TPKVKRIFEGAFQEARQLGDRVITPVHLLLAITTEKESLAGKILTQQGVDLKKLRTELINKNAEKSAAGATVGATNEPYR
FGTPGGRQASLSEFGINLTQQAAEGKLDPVVGRDREVERTIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPP
LLHDKQVFSLDLGLLLAGTRFRGEFEERLKGIVEEVRQAGNIILVIDEIHTLVGAGALGGSLDAANMIKPALARGELQCL
GTTTLNEYRQYIEKDAALERRFQPVKVGEPSITETIEILHGLRKQYEDHHKVKFSDAALTAAAKLSDRYISDRFLPDKAI
DLIDEAGSRMHVQYSQKKKAHPETEAEESPIINPQSLVPVVDEEEIAEIVSSWTGVPVNKVNETESESLIYLEARLHERI
IGQNEAVSAVARAVRRARVGMKDPNRPIASFVFAGPTGVGKTELAKALATFLFGAADAMIRLDMSEFMEPHTVSKLIGSP
PGYIGYDEGGQLTEAVRRKPYTVILFDEIEKAHPDVFNTLLQLLDDGRLTDAKGRTVDFKNTLIIMTSNIGSKVIEKGGG
GLGFAISDDIDESQYNYVRNLVTEEMKNYFRPEFLNRLDEIIVFRQLTKNEVKEIADILLQEIAIQLKEQRDISLDVTEQ
FKELVVKEGYDPSYGARPLRRAIMRRLEDSLAEAILAGQVRDGDNIIIDADDQGQVRILNSEKAVLHLQPVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7424_0011 YP_002375353.1 ATPase AAA VFG0080 Protein 3e-141 51
PCC7424_0011 YP_002375353.1 ATPase AAA VFG0079 Protein 0.0 50