Gene Information

Name : PCC8801_0954 (PCC8801_0954)
Accession : YP_002371187.1
Strain : Cyanothece sp. PCC 8801
Genome accession: NC_011726
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1005657 - 1008275 bp
Length : 2619 bp
Strand : +
Note : KEGG: mar:MAE_61840 ClpB protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGCAACCCACGAATCCTAACCAATTTACAGAAAAAGCTTGGGAAGCCATTGTGCGAACTCCCGATATTGCTAAACAACA
TAGTCATCAACAAATCGAAACAGAACATCTGATGAATTCCCTTTTGCAACAAGAGGGACTAGCTACTAGCGTCTTTAATA
AAGCAGATATTAGTGTTCAAAGATTACGCGATAAAACCGAAGAATTTATCCGTCGTCAACCCAAAGTTTCTAACCCTGGA
GAGTCTGTTTATTTAGGAAGAAGTTTAGATCAATTATTAGATCGCGCTGAACAATTTCGTCAAGAATTTGGGGATGATTA
CATCTCCATTGAACATTTATTGTTAGCCTACACTAAAGATGATCGCTTTGGCCAAGGCTTATTCAAAGAATTTAGCCTCA
ACGAAACCAAACTTAAAGAGATTATTAAACAAGTACGAGGAACGCAAAAAGTGACCGACCAAAACCCAGAAGGAAAATAT
GAATCTTTAGAAAAATATGGTCGAGATCTAACCCAATTAGCGCGAGAAGGTAAACTTGATCCCGTGATTGGAAGAGACGA
TGAAATTCGCCGTACTATTCAAATTCTCTCCCGTCGAACCAAAAATAATCCCGTTTTAATTGGAGAACCCGGAGTCGGTA
AAACCGCCATTGTAGAAGGGTTAGCACAACGAATTATTAACCGTGATGTGCCTGAATCTTTACGCGATCGCAAGTTAATT
GCCTTGGATATGGGAGCATTAATTGCCGGGGCAAAATATCGCGGAGAATTTGAAGAACGCCTCAAAGCCGTACTCAAAGA
AGTGACCGATTCCCAAGGCAATATTATCATGTTTATTGATGAAATTCATACCGTGGTGGGGGCAGGAGCAACCCAAGGCG
CGATGGATGCAGGGAACCTCTTAAAACCCATGTTAGCCCGGGGAGAATTGCGCTGTATTGGGGCAACAACCCTCGATGAA
TACCGTAAGTATATCGAAAAAGATGCAGCCCTAGAACGGCGTTTTCAAGAGGTTCTAGTGGATGAACCCAATGTGGTTGA
TACCATCTCTATTTTACGGGGACTCAAAGAACGGTATGAACTGCATCACGGGGTAAAAATTGCTGATACTGCGTTGGTTG
CTGCGGCGATGTTGTCTAACCGTTATATTAGCGATCGCTTTTTACCGGATAAAGCCATTGATTTAGTCGATGAAGCTGCT
GCTAAATTAAAGATGGAAATCACCTCCAAACCGGAAGAATTAGATGAAGTTGATCGCAAGATTCTTCAATTAGAAATGGA
ACGGTTATCCTTACAAAAAGAAGAAGATAAAGCCTCCCGTGAACGGTTAGAAAAACTCGAAAAAGAACTCGCCGATCTCA
AGGAACAGCAATCCCAATTAAACGCCCAATGGCAAGCCGAAAAAGGGGTCATTGATGAAATCCGTCAAGTCAAAGGAGCC
ATCGATCAGATTAACTTAGAAATTCAACAAGCTGAACGGGATTACGACCTTAATAAAGCTGCTGAATTACGCTATGGTAA
ATTAACGGATTTACAGCGAAAAATAAAAGAACTGGAAACTAAAATTGAAGAACGACAAATTATGGGTAAAACCTTGCTGC
GCGAAGAAGTTTTAGAGTCAGATATTGCAGAAATTATCTCTAAATGGACAGGGATTCCCCTTAGTAAATTAGTCGAATCT
GAGAAAGAAAAACTACTACAGTTAGAAGACGAACTCCATGAACGAGTTATTGGTCAAGAAGAGGCTGTAACGGCTGTATC
AGAAGCTATCCAGCGTTCCCGTGCAGGACTTTCTGATCCCAATCGTCCAACCGCTAGTTTTATTTTCTTGGGTCCAACTG
GAGTCGGTAAAACTGAATTAGCTAAGGCATTAGCGAAGAATCTTTTTGATACCGAAGAAGCCTTAGTTCGGATTGATATG
TCTGAGTATATGGAGAAACACGCGGTATCTCGTTTATTGGGGGCTCCTCCAGGGTATGTGGGCTATGATGAAGGGGGACA
ATTAACCGAAGCAATTCGCCGCCGTCCCTATTCGGTTATCCTCTTTGATGAGATTGAAAAAGCCCATAATGATGTCTTTA
ATGTCATGCTACAAATTCTCGATGATGGGCGTTTAACCGATGCTCAAGGTCATGTAGTAGACTTCAAGAATACTATCATT
ATTATGACCAGTAATATCGGGTCACAATACATTTTAGATGTCGCTGGAGATGACTCTCGTTATGAAGAAATGCGCTCCCG
TGTGATGGAAGCCATGACTAATAGTTTCCGTCCCGAATTTCTTAACCGTATCGATGAAATCATTATTTTCCACGGGTTAC
AAAAATCTCAATTACGCGAGATTATTAAACTCCAAGTTGCTTTGTTAGAAACGCGGTTATCTGAACAAAAAATCTATCTG
AAACTGTCAGAAGAAGCTCTAGATTTTGTGGCAGAAATTGGTTATGATCCCGTGTATGGTGCAAGACCCTTAAAACGGGC
TATCCAGAAATATTTAGAAACTGCGATCGCAAAGTCAATTCTACGGGGTGAATTTAAGGCAGGAGACACCATCTTTGTAG
ACGTAGAAGCCGAAAGATTAACCTTTAAACGGCTACCCTCTGAAATGTTAACCATCTAA

Protein sequence :
MQPTNPNQFTEKAWEAIVRTPDIAKQHSHQQIETEHLMNSLLQQEGLATSVFNKADISVQRLRDKTEEFIRRQPKVSNPG
ESVYLGRSLDQLLDRAEQFRQEFGDDYISIEHLLLAYTKDDRFGQGLFKEFSLNETKLKEIIKQVRGTQKVTDQNPEGKY
ESLEKYGRDLTQLAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKLI
ALDMGALIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERYELHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDEAA
AKLKMEITSKPEELDEVDRKILQLEMERLSLQKEEDKASRERLEKLEKELADLKEQQSQLNAQWQAEKGVIDEIRQVKGA
IDQINLEIQQAERDYDLNKAAELRYGKLTDLQRKIKELETKIEERQIMGKTLLREEVLESDIAEIISKWTGIPLSKLVES
EKEKLLQLEDELHERVIGQEEAVTAVSEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDM
SEYMEKHAVSRLLGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNVMLQILDDGRLTDAQGHVVDFKNTII
IMTSNIGSQYILDVAGDDSRYEEMRSRVMEAMTNSFRPEFLNRIDEIIIFHGLQKSQLREIIKLQVALLETRLSEQKIYL
KLSEEALDFVAEIGYDPVYGARPLKRAIQKYLETAIAKSILRGEFKAGDTIFVDVEAERLTFKRLPSEMLTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-101 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 7e-97 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 9e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC8801_0954 YP_002371187.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-110 41