Gene Information

Name : PCC8801_2049 (PCC8801_2049)
Accession : YP_002372237.1
Strain : Cyanothece sp. PCC 8801
Genome accession: NC_011726
Putative virulence/resistance : Resistance
Product : VatB
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2121312 - 2121947 bp
Length : 636 bp
Strand : -
Note : KEGG: pmu:PM1197 VatB

DNA sequence : 
ATGAATAGTTATCCCGATCCTAATAATCTTTACCCATTAAAGAATTATAATCGATTATGTTTTCTCAAAAATATGATTGA
GAATCCTAATATTATCGTCGGAGATTTCACCTATTACGATGACTTTGAAAACCCCAAAAACTTTGAGAAAAATGTACTTT
ATCACTTCGATTTTATTGGGGATAAGTTAATTATTGGTAAATTTTGTGCTATTGCCAGCGACGTTAAATTTATCATGAAT
GGAGCAAATCATCCTCTTAATTATTTTACGACCTATCCCTTTAGTATTTTTGGCCATGGGTGGGAAAATACGATGTCAGT
TGAAGGGACTTCTAAAGGGGATACCATCATTGGTAATGATGTTTGGTTGGGTTATAATGCTTTAATTATGCCAGGAATTA
CCGTCGGTGATGGGGCAATTATTGCGGCTAATTCAGTCGTTAGTAAAAATGTTGACCCCTATACTATTGTCGGCGGAAAT
CCCGCTAAATTAATTAGAAAACGCTTTGACGATGAGGTAATTAGTTTGTTATTAAAACTTCAATGGTGGGATTGGAATAT
TGAAAAAATAACTCAAAATATTAGTATACTTTGTAGTAATAATTTAGACGCTTTAAAGGAGTTATCTGTTAGCTAA

Protein sequence : 
MNSYPDPNNLYPLKNYNRLCFLKNMIENPNIIVGDFTYYDDFENPKNFEKNVLYHFDFIGDKLIIGKFCAIASDVKFIMN
GANHPLNYFTTYPFSIFGHGWENTMSVEGTSKGDTIIGNDVWLGYNALIMPGITVGDGAIIAANSVVSKNVDPYTIVGGN
PAKLIRKRFDDEVISLLLKLQWWDWNIEKITQNISILCSNNLDALKELSVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-33 45
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-33 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC8801_2049 YP_002372237.1 VatB AM180355.1.gene2499. Protein 4e-47 50
PCC8801_2049 YP_002372237.1 VatB JF268688.1.gene6.p01 Protein 8e-32 48
PCC8801_2049 YP_002372237.1 VatB CP001581.1.gene990.p Protein 1e-35 46
PCC8801_2049 YP_002372237.1 VatB AF322577.2.gene4.p01 Protein 7e-34 45
PCC8801_2049 YP_002372237.1 VatB AY740681.1.gene5.p01 Protein 7e-34 45