|
Name : PCC8801_1610 (PCC8801_1610) Accession : YP_002371818.1 Strain : Cyanothece sp. PCC 8801 Genome accession: NC_011726 Putative virulence/resistance : Unknown Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1685453 - 1687474 bp Length : 2022 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mar:MAE_04090 pilus biogenesis protein DNA sequence : ATGACTTATTCGTCTTCCACCAAGCGATCGCGTGCAGTCGCCCTGAGAAACTACTTCTCCCCCTTTGGGAATAAGTTGGT TGAAACCGGATACATCGCACCCGATCAAATGCAGCAAGCCCTAGTTGAAACTCGTAAAACTGGACTTCCCCTTGTCGAAG TGGTACAATCGCTAACCGGTCGTCAACTGCCCCCTGATTTACAACGACAATATAAAAAACACCATTTATTTGAACTAAAA ATCCTCTATGGAGTAGATTCAGTCGATCCCGAAATTAGTCCCGTCGCGGATCGACAAATGGCCGAACTGATTGGCACTCT AATCTCTTTTGACATCTGTCGTCGTCATAAACTGTTACCTATTTCTAAGCACGAAGGAGATCCCCCATATATCTTAGTGG CTATGGTTGATCCCGACAACTTAGCCGCCCAAGACGATCTCAATCGCATTGTAAGATCTAAAGGACTCAACCTCAAACGC ATGGTCATTACCCAAGAAGATTATGACCGACTCCTAGAACAATATCATGAATTGCAAACAGAACTAGACCAAGAAAAAGA ACGTCTAGATAAAGAAAAAGCCCTGGAAAAACTGGCTGACATCTCCAGTTTAGTCGATAATATGGACAATATAGGGGAGG TAAATGATGACGATGCCGATTCCCTAGATGCCAATGAAGCTAACAACGCCCCTATTATTAACCTAGTTAACAAAATTCTC GCCAAAGCCCTACAAGAAGGGGTATCGGATATCCACGTCGAACCCCAAGAAGAATCCCTACGCATTCGTTTTCGTAAGGA TGGGGTCTTACAACAAGCCTTTGATCCCCTGCCCAAAAAAATCATTGCAGCAGTGGTAGCACGGTTTAAGATTATGTCAG ACTTAGACATTGCCGAACGCCGTCTGCCTCAAGATGGAAAAATCCGCCGCATCTACCAAGGACGCAAAGTAGACTTTCGG GTGAATACCCTACCCAGTCGCTACGGCGAAAAAGTCTGTTTACGGATCTTAGATAACTCTGCTACCCAACTGGGATTAGA TAAATTAATCACCAATCAAGAAACCCTACAAATTGTCCGCGACTTAGCCAGTCGTCCCTTTGGCTTAATTTTGGTAACAG GACCGACGGGAAGTGGAAAATCCACCAGTTTGTACTCCGTGTTAGCCGAACGCAACAACCCAGGGGTTAACATTAGTACC GCCGAAGATCCCATTGAATACTCCTTACCCGGCATTACCCAAGTCCAGGTGATTCGGGAAAAAGGCATGAACTTTGCTTC TATTCTACGCGCCTTTATGCGACAAGATCCCGATGTCATTCTGGTGGGGGAAACGCGAGACGTAGAAACCGCTAAAACCG CCATTGAAGCTGCCTTAACGGGTCACTTAGTCTTAACCACCCTCCATACTAACGATGCCGCCGGTGCGATCGCCCGTCTC GATGAAATGGGAGTAGAACCCTTCATGATTTCTGGTGCCCTCCTCGGAGTCTTGGCGCAAAGGTTGATGCGACGAGTTTG TACTGAGTGTCGGGTTCCCTATAACCCCACTAAAGCTGAACTCGCCCGTTTTGGTCTATCGGCCTCCAATCAAGAAGAAA TCACTATCTACAAAGCCAATAAACTTACCCCAGAGGAAATTACTGAGGCTAAGACCAAGGGAAGCCTTTGTGCCAAATGT AATGGTAGCGGTTATAAAGGACGGGTCGGGGTCTATGAAGTGATGCGCAATACCGAAAAGATTCAAAGTCTAATCAACCA AGGGGCGACGACAGACCGCATTAAAGAAGCAGCCGTTGAAGAAGGGATGGTAACTATCCTTGCATACAGTTTGCAATTGG TGCAAGAAGGCTATACCACCCTCGAAGAAGTGGAACGGGTGACGTTTACCGACACGGGACTCGAATCGGAATTAAAAGCA AAACGCAAGAGTTCCCTCGAATGTCAAACCTGCAACGCCGAATTACAGCAAGAATGGTTGGACTGTCCCTATTGCCTCAC CCCCAGATTTATTAACAATTAA Protein sequence : MTYSSSTKRSRAVALRNYFSPFGNKLVETGYIAPDQMQQALVETRKTGLPLVEVVQSLTGRQLPPDLQRQYKKHHLFELK ILYGVDSVDPEISPVADRQMAELIGTLISFDICRRHKLLPISKHEGDPPYILVAMVDPDNLAAQDDLNRIVRSKGLNLKR MVITQEDYDRLLEQYHELQTELDQEKERLDKEKALEKLADISSLVDNMDNIGEVNDDDADSLDANEANNAPIINLVNKIL AKALQEGVSDIHVEPQEESLRIRFRKDGVLQQAFDPLPKKIIAAVVARFKIMSDLDIAERRLPQDGKIRRIYQGRKVDFR VNTLPSRYGEKVCLRILDNSATQLGLDKLITNQETLQIVRDLASRPFGLILVTGPTGSGKSTSLYSVLAERNNPGVNIST AEDPIEYSLPGITQVQVIREKGMNFASILRAFMRQDPDVILVGETRDVETAKTAIEAALTGHLVLTTLHTNDAAGAIARL DEMGVEPFMISGALLGVLAQRLMRRVCTECRVPYNPTKAELARFGLSASNQEEITIYKANKLTPEEITEAKTKGSLCAKC NGSGYKGRVGVYEVMRNTEKIQSLINQGATTDRIKEAAVEEGMVTILAYSLQLVQEGYTTLEEVERVTFTDTGLESELKA KRKSSLECQTCNAELQQEWLDCPYCLTPRFINN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-72 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-72 | 41 |
