Gene Information

Name : PCC8801_1416 (PCC8801_1416)
Accession : YP_002371629.1
Strain : Cyanothece sp. PCC 8801
Genome accession: NC_011726
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1483372 - 1484049 bp
Length : 678 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: amr:AM1_5540 two-component transcriptional regulator

DNA sequence : 
ATGAAAATCTTATTAGTGGAGGATGACGAAAATATTGCGCTACCCGTAGTGGAAGATCTCAGCGATCGCCATTATATTGT
CGAAGTTGCCCAGGATGGCGAAATGGCCTTTGAACTGCTCGATGTTTATGAGTATGACTTAATCTTGCTCGATATTATGC
TACCGAAGATAGACGGCATTTCCCTCTGTCGGCGATTACGATCACAAGGTTGTCAGACTCCTATTTTGATGCTAACGGCC
AGGGATACGGTCAGCGATCGCGTCGCGGGACTCGATGCGGGAGCGGACGATTATTTGGTTAAACCCTTTGCTTTGCAAGA
ATTATCAGCCCGAATCCGCGCCTTAATGCGTCGAGGAGACTCCAGCTTACCTCCGGTGTTAACTTGGGGGAATTTATCCC
TTAATCCGAACACTTGCGAAGTCTTCTACCAAGAACAGCCCTTAAGTCTCAGTCCGAAAGAGTATAAGCTGCTGGAATTT
TTCCTGCGTCATCCCCATCGGGTGTTTAATCGGACGCAAATTCTCGATCATCTGTGGCCTTTAGAACAATTACCCGAAGA
AGCAACTGTCAAAGCCCATATCAGCAGTTTACGCCAAAAAATCAAAGCCGTTGGTGGTGTTCCTGATCTGATTGAGACGG
TTTATGGCTTAGGGTACCGTCTTAAAGAGCAACCCTGA

Protein sequence : 
MKILLVEDDENIALPVVEDLSDRHYIVEVAQDGEMAFELLDVYEYDLILLDIMLPKIDGISLCRRLRSQGCQTPILMLTA
RDTVSDRVAGLDAGADDYLVKPFALQELSARIRALMRRGDSSLPPVLTWGNLSLNPNTCEVFYQEQPLSLSPKEYKLLEF
FLRHPHRVFNRTQILDHLWPLEQLPEEATVKAHISSLRQKIKAVGGVPDLIETVYGLGYRLKEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-34 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC8801_1416 YP_002371629.1 winged helix family two component transcriptional regulator BAC0347 Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC8801_1416 YP_002371629.1 winged helix family two component transcriptional regulator VFG1390 Protein 5e-41 44
PCC8801_1416 YP_002371629.1 winged helix family two component transcriptional regulator VFG1563 Protein 2e-34 41
PCC8801_1416 YP_002371629.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-34 41