Gene Information

Name : sph (BCB4264_A0708)
Accession : YP_002365468.1
Strain : Bacillus cereus B4264
Genome accession: NC_011725
Putative virulence/resistance : Virulence
Product : sphingomyelin phosphodiesterase C
Function : -
COG functional category : R : General function prediction only
COG ID : COG3568
EC number : -
Position : 699951 - 700952 bp
Length : 1002 bp
Strand : +
Note : identified by match to protein family HMM PF03372; match to protein family HMM TIGR03395

DNA sequence :
GTGAAATGTAAATTGCTAAAAGGTGTACTTAGCTTAGGTGTTGGTTTAGGAGCTTTATATAGCGGAACGTCAGCTCAAGC
AGAAGTGTCTACAAATCAAAATGATACATTAAAAGTGATGACGCATAATGTATATATGCTATCAACAAACTTATATCCGA
ACTGGGGACAAACTGAGCGTGCTGATTTAATCGGGGCGGCAGATTATATAAAGAATCAAGATGTAGTTATATTAAATGAA
GTGTTTGATAATAGCGCTTCAGATCGTTTATTAGGGAATTTGAAGAAAGAATATCCAAATCAAACAGCAGTATTAGGTCG
TAGTAGTGGAAGTGAATGGGATAAAACGTTAGGAAACTATTCATCTTCAACTCCTGAAGATGGTGGCGTTGCGATTGTGA
GCAAATGGCCAATCGCTGAAAAGATTCAATATGTATTTGCAAAAGGATGCGGGCCAGATAATTTATCGAATAAAGGATTT
GTATACACGAAAATTAAGAAAAATGATCGCTTCGTTCACGTGATTGGTACGCATTTGCAAGCGGAAGATAGTATGTGCGG
AAAAACTTCACCTGCATCTGTACGTACAGACCAATTAAAAGAAATTCAAGACTTTATTAAAAATAAAAATATACCAAATA
ATGAGTATGTGTTAATTGGCGGTGATATGAACGTAAATAAAATTAATGCAGAGAACAAGAATGATTCAGAGTATGCATCT
ATGTTTAAAACATTGAACGCTTCTGTACCATCTTATACTGGACATACAGCGACTTGGGACGCAACGACAAACAGTATTGC
AAAATATAATTTCCCTGATAGTCCTGCTGAGTATTTAGATTATATTATTGCAAGTAAAGACCATGCGAACCCATCATATA
TAGAGAATAAGGTGTTACAGCCGAAATCTCCACAATGGACTGTTACATCGTGGTTCCAAAAATATACGTATAATGATTAC
TCTGATCATTATCCAGTAGAGGCGACTATTTCTATGAAGTAG

Protein sequence :
MKCKLLKGVLSLGVGLGALYSGTSAQAEVSTNQNDTLKVMTHNVYMLSTNLYPNWGQTERADLIGAADYIKNQDVVILNE
VFDNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQYVFAKGCGPDNLSNKGF
VYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYAS
MFKTLNASVPSYTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTYNDY
SDHYPVEATISMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 4e-71 59
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 4e-71 59
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 3e-71 59
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 2e-77 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sph YP_002365468.1 sphingomyelin phosphodiesterase C VFG1798 Protein 2e-78 59
sph YP_002365468.1 sphingomyelin phosphodiesterase C VFG0674 Protein 1e-77 55