Gene Information

Name : BCB4264_A5230 (BCB4264_A5230)
Accession : YP_002369889.1
Strain : Bacillus cereus B4264
Genome accession: NC_011725
Putative virulence/resistance : Virulence
Product : perfringolysin O
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5031511 - 5033049 bp
Length : 1539 bp
Strand : -
Note : identified by match to protein family HMM PF01289

DNA sequence :
GTGATTTTTCTGAATATTAAGAAAAACACTAAAAAAAGAAAGTTCCTTGCATGTTTATTAGTTAGTCTATGCACTATTAA
TTACTCATCTATTTCCTTCGCAGAAACACAAGCAAGTAATGCAACTGATGTAACCAAAAATGCTAGTGGTATTGATACTG
GTATAGCAAATCTTAAATATAATAATCAAGAGGTTTTAGCTGTAAATGGTGATAAAGTAGAGAGTTTTGTTCCGAAAGAA
AGTATCAATTCAAATGGTAAATTTGTAGTAGTAGAACGCGAAAAAAAATCACTTACAACGTCACCAGTCGATATTTCAAT
TATTGATTCTGTAGTGAATCGCACGTATCCAGGAGCTGTACAACTTGCAAATAAAGCTTTTGCAGACAATCAGCCAAGTT
TATTGGTGGCTAAAAGAAAGCCTTTGAATATTAGTATAGACTTACCGGGCATGAGAAAAGAAAATACAATCACTGTCCAA
AATCCGACATATGGTAATGTAGCTGGAGCAGTAGACGATTTAGTATCTACTTGGAATGAAAAGTATTCTACAACACATAC
GTTGCCTGCAAGAATGCAGTATACGGAATCCATGGTTTATAGTAAATCGCAAATCGCAAGTGCTCTTAATGTTAACGCTA
AATATCTTGATAACAGTCTAAACATTGATTTTAATGCAGTTGCAAATGGAGAGAAAAAAGTGATGGTTGCCGCATATAAG
CAAATATTTTATACGGTAAGTGCTGAACTACCTAACAATCCATCCGACCTTTTTGATAATAGTGTTACTTTTGATGAATT
AACTCGAAAAGGCGTAAGTAATTCGGCTCCACCTGTTATGGTTTCAAATGTAGCTTATGGTAGAACAATTTATGTAAAAT
TAGAAACAACATCTAAGAGCAAAGATGTACAAGCTGCCTTTAAAGCCTTACTTAAGGATAACAGCGTTGAAACAAGTGGA
CAGTATAAAGATATTTTTGAAGAAAGTACCTTTACTGCTGTAGTATTAGGCGGAGATGCGAAAGAGCATAACAAGGTTAT
TACTAAAGATTTCAATGAAATCCGAAATATCATTAAAGATAATGCTGAATTAAGTCTTAAAAATCCAGCATACCCAATTT
CATATACAAGTACTTTCTTAAAAGATAATGCAACTGCTGCTGTTCATAACAATACAGATTATATTGAGACGACAACTACA
GAATATTCAAGTGCTAAAATGACACTTGATCATTACGGTGCTTACGTTGCTCAATTTGATGTATCTTGGGATGAATTCAC
ATTTGACCAAAAGGGTAACGAAGTACTAACACATAAAACGTGGGATGGTAGCGGAAAAGACAAAACGGCTCATTACTCTA
CAGTTATCCCTCTTCCACCGAACTCAAAAAATATAAAAATTGTAGCAAGAGAATGTACAGGTCTTGCATGGGAATGGTGG
AGAACAATTATTAATGAACAAAATGTTCCATTAACAAATGAAATAAAAGTTTCAATTGGAGGAACAACATTATATCCAAC
AGCTAGTATTAGTCATTAA

Protein sequence :
MIFLNIKKNTKKRKFLACLLVSLCTINYSSISFAETQASNATDVTKNASGIDTGIANLKYNNQEVLAVNGDKVESFVPKE
SINSNGKFVVVEREKKSLTTSPVDISIIDSVVNRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTITVQ
NPTYGNVAGAVDDLVSTWNEKYSTTHTLPARMQYTESMVYSKSQIASALNVNAKYLDNSLNIDFNAVANGEKKVMVAAYK
QIFYTVSAELPNNPSDLFDNSVTFDELTRKGVSNSAPPVMVSNVAYGRTIYVKLETTSKSKDVQAAFKALLKDNSVETSG
QYKDIFEESTFTAVVLGGDAKEHNKVITKDFNEIRNIIKDNAELSLKNPAYPISYTSTFLKDNATAAVHNNTDYIETTTT
EYSSAKMTLDHYGAYVAQFDVSWDEFTFDQKGNEVLTHKTWDGSGKDKTAHYSTVIPLPPNSKNIKIVARECTGLAWEWW
RTIINEQNVPLTNEIKVSIGGTTLYPTASISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 6e-151 63
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 3e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCB4264_A5230 YP_002369889.1 perfringolysin O VFG2275 Protein 4e-175 71
BCB4264_A5230 YP_002369889.1 perfringolysin O VFG0976 Protein 1e-151 63
BCB4264_A5230 YP_002369889.1 perfringolysin O VFG0074 Protein 3e-101 43
BCB4264_A5230 YP_002369889.1 perfringolysin O VFG1363 Protein 2e-101 42