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Name : Sbal223_4470 (Sbal223_4470) Accession : YP_002364291.1 Strain : Genome accession: NC_011668 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 51610 - 54864 bp Length : 3255 bp Strand : - Note : KEGG: shn:Shewana3_4244 HsdR family type I site-specific deoxyribonuclease; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases DNA sequence : ATGATCACTGAAGACCAGTTAGAACAAGAATGTATTAGATGGTTCACCGACCAAGGTTATCTGTATAAAAATGGCTATGA CATCGCACCTGATGGCGATTCTCCAGAGCGTGATGATTATCATCAAGTTGTTTTAAAACAACGGCTATTAAATCAATTAG CAATCATCAATCCAGAGCTTCCGATAGAGGCACTGAATGATGTGGTTAACACGGTATCTTCCCCCGATACGCCAATTCTT ATTAAAAACAACCGTGTATTCCACAAGTTTGTGATTGAAGGGGTGCCTGTCGAATACACGGCAGTTGAAGACGGCGAATC GAAAACTAAGCATACTCACGCTCAGTTAATGGATTTTACGACGACTGATAACAATGAATTCCTTATCGTGAATCAGTTTA CGATTACAGGTACAAAAGGGAATCGCCGTCCCGATGTTTTGGTGTTTATTAACGGCTTGCCCATCTCTGTTATTGAGTTG AAAAATCCAGCCGATGAGCATGCCGACATTTGGAATGCCTTTAATCAACTTCAAACCTACAAAGATGAAATTTCAGATCT GTTTATTTTCAATGAAGCGCTGGTTGTTAGCGATGGTTGGACTGCCCGTGTTGGCTCATTGACGGCGAATAAAGAGCGTT TCCTACCATGGAAAACTGTAACTGGCGAAGACGATAAACCCTTACTGGAGTTTCAACTAGAAACCATGGTGCGTGGTTTC TTCAAACCAGATTTGCTACTTGATTATATTCGTTACTTTATTCTCTTTGAGATCGATAATGACAACATCATTAAGAAGAT AGCTGGCTATCACCAGTTTCATGCTGTACGTGCTGCGGTAGAAGCGACCGTTAAAGCTAAACAAGCAGATAGCGATTTAC CTATGGTTGCTGAGAGTATAGGCAAATATCAGGTTCAAGCGACAAAAGGCTTAGATAAGATTAAAGCGGGTAGCGGTAAG GCTGGAGTGGTTTGGCATACTCAGGGCAGTGGTAAGAGTATCTCGATGGTGTGCTACGCCAGTAAGCTGCTGCAACAGCC TGCAATGAATAACCCCACTATTGTGGTGGTGACAGACCGTAATGATCTTGATGGTCAGCTTTACAATACTTTTGGTATGG CACAAGAGACATTAAAGCAGATCCCACAACAGGCAGATGGTCGAGACTTGTTGCGTCAATTACTGTTAAATCGTCAATCG GGTGGGATCATTTTTACCACCATTCAAAAGTTTGCATTATTAGACGATGAAATTGAGCATCCTATCCTGTCAACGCGTGC CAACATTGTAGTGGTGTCTGATGAAGCGCACCGCAGCCAATATGGCAATAAGTCGAAGTTAGTCGAGGTTAAAGACGCCA ATGGCAATGTGACAGGCTCTAAGTATGTCTTTGGTTACTCAAAATACATGCGCGATGCGCTGCCAAATGCTTCATTCATT GGCTTCACAGGCACTCCGATTGCCATGGATGATAAAGATACACGTGGTGTGTTTGGCGAGTATGTCTCTGTCTATGATAT TCAAGATGCGGTAGATGATGGTGCCACAGTACCAATCTACTATGAATCTCGTTTAGCTAAGCTTGATATCAATCAAGCTG AGATTGAGGAGCTTAACGACCAAGTCGAAGATGAAATCGGTGAGGAAGAAGAGACAGCTAGCCGTGAACAAATCAAATCA CAATGGGCAACACTAGAAAAGCTCGTTGGTGCTGAGCCTCGTATTCAGCAAGTCGCTCTCGATTTGGTGAACCATTTTAG CACTCGCAGCGAGACGTTTCCCGGCAAAGCCATGATTGTAGCGATGAGCCGTGAGATCTGTGTCGATCTTTACAATGCTA TTGTCGCAATAAAGCCTGAATGGCATCACCCCGATCCCGATAAAGGCGCAATCAAAATTGTGATGACGGGCAGCGCCTCT GACAAAGAGAAGATGCAGCCTCATATTCATGATAAGAAGACCAAAAAGCTGTTTGAAAAACGCTATAAAGATACCCAAGA CGAACTTCAATTGGTGATTGTGCGTGATATGTGGCTAACAGGCTTCGATGCGCCATGTTGTCATACCATGTATATCGATA AGCCGATGAAGGGGCACAATTTGATGCAGGCTATTGCACGCGTAAATCGTGTGTTTAAAGATAAGCCGGGCGGTTTAGTG GTTGATTATATCGGTATTGCCAATGAGCTAAAAAATGCCCTTAAAACCTATACAAATAGCCAAGGTAAAGGGCAACCAAC AGTTGATACAGCTGAAGCGTTTTCAGTATTAATGGAAAAAATTGATATTGTGAGAGGTATGTTTGCCACGCCAGTTGATG GTGCCGTATTTAACTACCGACCTGAGTTTGAAACGAATGCATTGCGTCTGTTGCCTGGGGCTGTAAACCATTTATCAGGT TTATCTCATCGCAATAGTAAAGGTGAAGAGGTACGAGATGGTAAACGGCGCTTCTTGGATGTAATGGCGGCAATGACTAA AGCGTTTTCTCTATGCAATACCATGGATGAAACCCAAGGTTATAAAAACGAAATAGCTTTCTACTCTGCGATTAAAACCG CTTTTATCAAACATTCAACAGTTGATAAAAAACGCAGTGATGAAGAACGTAACACAGCATTAAAGCAGATATTAGATAAC GCAATTATTGCTGATGGTGTTGATGACATCTTTAATATGGTGGGGTTAGATAAACCTAATATTGGTTTACTCTCTGAGGA GTTCTTGGAAGATGTGAAGAACATGAAAGAGAAGAACCTTGCCGTTGAGTTACTAGAGAAGTTGCTGCGTGATGAGGTGA AAGCGCGGATGAAGAATGATGTGGTGCAGGAGAAGAAGTATTCTGAGCGCATCATGACAACACTGCAAAAGTATCATAAT CGCAGTATTGAAACGGCTCAGGTTATTGAAGAACTAATCAAATGGGCGAAAGAGATGGCTGCTGATGCTGAGATGGCGGA AGGTCTAAATCTATCTCCTGATGAAATTGCTTTTTATCGAGCATTGGTCATGAACGAAGCTTCAGTGCGAGAACTGGGTG ATGATAGTTTGCGTGGTTTAGCTATCGAGTTAACTCAACAGCTGCGTAAGTCAGCTACGGTAGACTGGCAAAAGCGTGAT AGTGTTCGAGCACGTATGCGTAATTTAGTTCGTCGTCTGCTGCGCCGCTGGAAGTATCCACCTGACGCCGCAGAAGCTGC GATTAAGTTAGTGCTTGAGCAAGCAGAAGTACTGGCTGATGACTGGTATAGGTAA Protein sequence : MITEDQLEQECIRWFTDQGYLYKNGYDIAPDGDSPERDDYHQVVLKQRLLNQLAIINPELPIEALNDVVNTVSSPDTPIL IKNNRVFHKFVIEGVPVEYTAVEDGESKTKHTHAQLMDFTTTDNNEFLIVNQFTITGTKGNRRPDVLVFINGLPISVIEL KNPADEHADIWNAFNQLQTYKDEISDLFIFNEALVVSDGWTARVGSLTANKERFLPWKTVTGEDDKPLLEFQLETMVRGF FKPDLLLDYIRYFILFEIDNDNIIKKIAGYHQFHAVRAAVEATVKAKQADSDLPMVAESIGKYQVQATKGLDKIKAGSGK AGVVWHTQGSGKSISMVCYASKLLQQPAMNNPTIVVVTDRNDLDGQLYNTFGMAQETLKQIPQQADGRDLLRQLLLNRQS GGIIFTTIQKFALLDDEIEHPILSTRANIVVVSDEAHRSQYGNKSKLVEVKDANGNVTGSKYVFGYSKYMRDALPNASFI GFTGTPIAMDDKDTRGVFGEYVSVYDIQDAVDDGATVPIYYESRLAKLDINQAEIEELNDQVEDEIGEEEETASREQIKS QWATLEKLVGAEPRIQQVALDLVNHFSTRSETFPGKAMIVAMSREICVDLYNAIVAIKPEWHHPDPDKGAIKIVMTGSAS DKEKMQPHIHDKKTKKLFEKRYKDTQDELQLVIVRDMWLTGFDAPCCHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLV VDYIGIANELKNALKTYTNSQGKGQPTVDTAEAFSVLMEKIDIVRGMFATPVDGAVFNYRPEFETNALRLLPGAVNHLSG LSHRNSKGEEVRDGKRRFLDVMAAMTKAFSLCNTMDETQGYKNEIAFYSAIKTAFIKHSTVDKKRSDEERNTALKQILDN AIIADGVDDIFNMVGLDKPNIGLLSEEFLEDVKNMKEKNLAVELLEKLLRDEVKARMKNDVVQEKKYSERIMTTLQKYHN RSIETAQVIEELIKWAKEMAADAEMAEGLNLSPDEIAFYRALVMNEASVRELGDDSLRGLAIELTQQLRKSATVDWQKRD SVRARMRNLVRRLLRRWKYPPDAAEAAIKLVLEQAEVLADDWYR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 62 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 44 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 44 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 44 |
