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Name : Tmz1t_2408 (Tmz1t_2408) Accession : YP_002364235.1 Strain : Genome accession: NC_011667 Putative virulence/resistance : Unknown Product : Integrase catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 71552 - 73042 bp Length : 1491 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: pol:Bpro_5321 ISPsy20, transposase IstA DNA sequence : ATGAATCTGCTGGGGAAGGTCAGAAGGCTGTACTACCGGGAGGGGCTCACGCTCTCGGAGATCGAGCGTCGCACGGGGCT GACGCGCAAGACGATCCGCAAGTGGCTGAAGGCGCCCGAGGGGGTTGAGCCGAAGTATCGACGCAAGGTCGTCGACACCA AGATCGCGCCGTACGCGGCGCAGTTGGTCAAGATGTTGGAGACCGATGCGCGGCGACCGCAACGGGACCGACGCACGGCG CTGAAGCTGTTTGGTCAGTTGCAGGTGCAGGGGTTCGACGGCGATTACAGCCGCGTCACCGAGTTCATCCGGCGCTGGAG GGCCGAAGGCGGTGCCTCGGTCACGAAGGCCTTCGTTCCGCTGCAGTTCGAGCCGGGAGAGGCGCACCAGTTCGACTGGA GCGAGGAGCATCTGGTCATCGGTGGGGTGTGGCGCAAGGTGCTCGTGGCGCACCTGAAGCTGTGCTACAGCCGTGCCTTT GTCGTGCAGGCGTATCCGACGCAGAGCCACGAGATGCTGTTCGATGCGCACGCGCGGGCGTTTGCTGCGCTCGGGGGCGT GGCCCGGCGCGGGATCTACGACAACATGAAGACGGCCGTCGACCGGGTGAAGAAAGGCAAGGCGCGGGTGGTCAATACAC GCTTTGCGGCGATGGCCTCGCACTACCTGTTCGAAGCGGACTTCTGCAATGTTGCCAGCGGTTGGGAGAAAGGCGTCGTC GAGAAGAACGTGCAGGACAGCCGACGGCGGATCTGGCAAGAGGCGGCCGAGACGCGCTTTGGTTCCTTCACCGAGCTGAA CCTGTGGTTGCTGGCGAAGTGTCGCAGCCTGTGGCAGGAGCTCAAACATCCGGAGTACGACCTCAGCCTGGCGGAGATGC TCGAGCAGGAGCAGCCCAGCCTGATGCCGATGATCACGCCCTTCGACGGCTACGTGGAGACGCTGGGCAAGGTCTCGAGC ACCTGCCTGGTTACGTTCGAGCGCTGCCGCTATTCAGCGCCGTGTGAGTTGGTGGGTCAGATGGTCGGCATCCGGGTGTA TCCCGAGCAGATCGAGCTCGTCGCGCACGACACCGTCGTGGCCCGTCACGTGCGCAGCTTTGCGCGCAACGAAGCGCGCT ACGACTGGCAGCACTATGTGTCGCTGATCGAGCGCAAGCCGGGCGCGCTCAGGAATGGCGCGCCCTTCGCCGACATGCCT GCGCCATTGCAAGCGCTGCGCGCGTTGCTGCTCAAGCGCGAAGGGGGAGATCGGGTCATGGCGAAGGTGCTCGCCGCCGT GCCTCAGCATGGCCTGGGGGCGGTGATCGTGGCGGTGGAGTTGGCGCTCGAAGCGGGCCGCCCCAGCCCCGAGCACATCG AGAACGTGCTCAACCGCCTGAAGTCAGCCCCTGCCACGCCGACCGTCGACACGGTACTGACCCTCAGCGAAACACCGGTG GCAGACCCGCAGCGTTACGACCGGCTGCGTGCGGAGGTGAGCCATGCGTGA Protein sequence : MNLLGKVRRLYYREGLTLSEIERRTGLTRKTIRKWLKAPEGVEPKYRRKVVDTKIAPYAAQLVKMLETDARRPQRDRRTA LKLFGQLQVQGFDGDYSRVTEFIRRWRAEGGASVTKAFVPLQFEPGEAHQFDWSEEHLVIGGVWRKVLVAHLKLCYSRAF VVQAYPTQSHEMLFDAHARAFAALGGVARRGIYDNMKTAVDRVKKGKARVVNTRFAAMASHYLFEADFCNVASGWEKGVV EKNVQDSRRRIWQEAAETRFGSFTELNLWLLAKCRSLWQELKHPEYDLSLAEMLEQEQPSLMPMITPFDGYVETLGKVSS TCLVTFERCRYSAPCELVGQMVGIRVYPEQIELVAHDTVVARHVRSFARNEARYDWQHYVSLIERKPGALRNGAPFADMP APLQALRALLLKREGGDRVMAKVLAAVPQHGLGAVIVAVELALEAGRPSPEHIENVLNRLKSAPATPTVDTVLTLSETPV ADPQRYDRLRAEVSHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 4e-140 | 59 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 1e-100 | 47 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 2e-81 | 44 |
