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Name : Msil_0910 (Msil_0910) Accession : YP_002361242.1 Strain : Methylocella silvestris BL2 Genome accession: NC_011666 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 997311 - 998996 bp Length : 1686 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: bja:bll6021 general secretion pathway protein E DNA sequence : ATGAGCTCCAGCTCTTTAGACGAATTCGCTAAATTCCTCGTAAATAAGAAACTGCTGTCGTCCGAGGCGACGGTCGCGAC CCTCGTCTCAAGCGAGCCGACCGGCGAGCCGGTCTTACGGAAAATCTGGGAGGCGACAGACCTTTCGGCGAATGGATTTG CAGACGAAGTCGCGCATTTTTATGGCATGCGGCGCCTGAGTCTGCCGGAGCTTGTCGCGGCGAAAGCGCTGACCGACCGG TTTTCGGCCCGTTTCCTGCGCGAAACGTCGATCTTTCCGTTCAGGGCCGAGGATGGCGGCTTAAAGCTCGCCGCCGCCGA TCCAAGCGACCGCGCCGCCGCGCGGGCGGCGGAGATCGTGCTCGGCGGACCGGTCGAGGTCGAGGTCGCCTCTTTCGAAG ATATTGCGATCATCCTCGGCGAGCGGATCGGCGCGGATGAGGCCGCCTCGCCCGACGAACGGCGGCCGAGCGCCAGCGCC GACGACGACATTGAAAGCCTGCGCGACCTCGCCAGCGGCGCCCCCGTCGTGCGCGCCGTCAACGATCTGCTCGAACGCGC CGTCGAGCTCCGCGCCAGCGACATCCACATCGAGCCGTTTCGCAACGGGCTGACCGTGCGCATGCGCGTCGACGGACTGC TGCGGACGGTTCCGGCGCCCGCCGACGCCCTGCCGCAAGCCCTGCTGTCGCGCATAAAAATCCTCGCGGGCCTCAATATC GCCGAACGGCGCCTGCCGCAGGACGGCGCCGCGCGCCAGCGCATCGCAAGGTCCGACATCGACATTCGCGTCGCGACCAT GCCGACGCAATATGGCGAATCCGCTGTGCTCCGCCTCCTGCCGCAGGATCGCGGCCTGCTCGACGTCGCAAGGCTCGGCC TCTCCGCCGCGGATGAAAAAATTTTGATGCGGCTGCTCGAGCTTCCGCATGGGCTGCTTGTCGTCACCGGCCCGACCGGC AGCGGCAAGACGACCTCGCTCGCGACCATGCTGTCGCTCTTGAACCAGCCCTCGCGGAAAATCCTGACCATCGAGGATCC GGTCGAATATGAATTGCCGGGGGTGAACCAGAGCCAGGTCAAGGCTGGCATCGGTCTGACCTTCGCCACGGCGATGCGCG CCTTCGTGCGCCAGGATCCCGACGTCATCATGGTCGGCGAGGTGCGCGATTCTGAGACGGCGAACATCGCCGTCCACGCC GCGCTGACCGGCCATCTGGTGTTGACGACGCTGCACACCGAATCCGCGGCCGCCGCCATCCCGCGTCTGCTCGATCTCGG CGTCGAGGGGTTCTTGCTGAAATCGACGCTGCGGGCGGTGATCGCGCAGCGTCTTGTGCGGGTGCTCTGCGAGCGCTGCA AGAAGAAGCGCATTTTGACGCAGGAGGCGCTGGAGGCCGATCCGCGGCTCAGCGCGCTCGGCCTTCGTTGCGACGACGCC ATCTATGAGCCGGTCGGCTGCGAGCGCTGCGGCGGCTTTGGCTATCGCGGCCGTAACGGAATCTTCGAGATCCTCGAGCT CAAGGGCGAGGCCTATGAACTGGTTGGCCCGCATGCCGACGCGCACAGCATCGACCGCGCCGCCCGCCGCGCCGGCATGA CGACGATGGTCGAGGACGCCGTCGCCAAATGCCGATCAGGCGTCACCTCGACCGCCGAGGTTTTGCGGGTGACCACGATC CGCTGA Protein sequence : MSSSSLDEFAKFLVNKKLLSSEATVATLVSSEPTGEPVLRKIWEATDLSANGFADEVAHFYGMRRLSLPELVAAKALTDR FSARFLRETSIFPFRAEDGGLKLAAADPSDRAAARAAEIVLGGPVEVEVASFEDIAIILGERIGADEAASPDERRPSASA DDDIESLRDLASGAPVVRAVNDLLERAVELRASDIHIEPFRNGLTVRMRVDGLLRTVPAPADALPQALLSRIKILAGLNI AERRLPQDGAARQRIARSDIDIRVATMPTQYGESAVLRLLPQDRGLLDVARLGLSAADEKILMRLLELPHGLLVVTGPTG SGKTTSLATMLSLLNQPSRKILTIEDPVEYELPGVNQSQVKAGIGLTFATAMRAFVRQDPDVIMVGEVRDSETANIAVHA ALTGHLVLTTLHTESAAAAIPRLLDLGVEGFLLKSTLRAVIAQRLVRVLCERCKKKRILTQEALEADPRLSALGLRCDDA IYEPVGCERCGGFGYRGRNGIFEILELKGEAYELVGPHADAHSIDRAARRAGMTTMVEDAVAKCRSGVTSTAEVLRVTTI R |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-70 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-70 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msil_0910 | YP_002361242.1 | type II secretion system protein E | VFG0182 | Protein | 6e-72 | 48 |
| Msil_0910 | YP_002361242.1 | type II secretion system protein E | VFG1876 | Protein | 6e-74 | 46 |
| Msil_0910 | YP_002361242.1 | type II secretion system protein E | VFG2048 | Protein | 7e-70 | 46 |
| Msil_0910 | YP_002361242.1 | type II secretion system protein E | VFG1880 | Protein | 3e-67 | 43 |
