Gene Information

Name : Msil_3919 (Msil_3919)
Accession : YP_002364162.1
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 4297383 - 4299014 bp
Length : 1632 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bid:Bind_3361 ABC transporter related

DNA sequence :
ATGATCCCGGCTGCCGCCCCCCTGCTCGACATTCGCGATCTCTCCGTCTCCTTCCGCGCCGGCGCGGCGCGGACGCGCGC
GGTCGACGGCGTCTCTTTTGCGCTTGAGAGCGGCCGCACGCTGGCGCTTGTCGGCGAATCGGGCTCGGGCAAATCGGTCA
CTGCGCTCTCGATCCTGCGGCTGCTGGCGCCCGGCGCCGAAACGCAGGGAAACGCCCTGTTCGACGGCGAGGACCTGCTG
GCCGCGTCCGAGGAGCGGCTTCGCGCCATCAGGGGCGCGCGGATCACCATGGTGTTCCAGGAGCCGATGACATCACTTAA
TCCGCTGCACAGCATCGAAAAGCAGATCGGTGAAATTCTGGAGCTGCACGGCGCCCGCGGCGCCGAAAAAATCCGCGCCC
GGGTCGTCGAGCTTCTCGGCGAGGTGGGCATCCCCGATCCCGCCGATCGGCTGGCCGCCTATCCGCATCAGCTGTCGGGC
GGCCAGCGCCAGCGCGTCATGATCGCCATGGCGCTCGCCAACCGCCCGGATCTCTTCATCGCCGACGAGCCGACGACCGC
GCTCGACGTGACCGTGCAGGCGCAGATCCTCGACCTCTTGAAACGGCTGCAGGCGCGCCATGGCATGGCGATGCTGTTCA
TCACCCATGACCTGAATATCGTGCGCAAAATCGCCGACGACGTCGCCGTCATGCAGAAGGGGCGCATCGTCGAAACGGGG
CCGGTCGCGACGATTTTTTCCGCGCCGCGCCATCCCTATACCTGCGCGCTGCTCGCCGCCGAGCCCAAAGGCGCGCCGCC
GCCGTTTAACGCTGCGGCTCAGCCCATCGTCAGCGCCGACAACATTAAAGTCTGGTTTCCGATCAAGCGCGGCTTTTTTC
GCCGCACCATCGGCTACGTTAAGGCGGTCGACGGGGTCAGCGTCACCGTGCGGGAAGGCGAGACGGTCGGCGTCGTTGGG
GAATCGGGCTCGGGCAAGACCACGCTTGGCCTCGCCTTGCTGCGGCTGATCCGCTCGGAGGGCGCTATCGTCTTCCTCGG
CCAGCGCATTGACGGGTTGCGCTTCAAGGAGCTGCGGCCGATCCGGCGCGACATGCAGATCGTGTTTCAGGATCCCTATG
GCTCGTTGTCGCCGCGCCTGCCGGTCGCCGATATCGTCGCGGAAGGGCTCGGCGTACAGGACAAGAGCCTCAGCTACAGC
CAAAAACGAGAGATTGTCGCCCGGGCGCTCGCCGACACCGGCCTCGATCCGGCGGCGATGGACCGCTATCCGCATGAATT
TTCAGGCGGCCAGCGTCAGAGAATCGCCATCGCCCGCGCCATGGTGCTTGAGCCGAAATTCATCGTTCTCGACGAGCCGA
CCTCTGCGCTCGACATGTCGGTTCAGGCGCAGATCGTCGATCTTTTGCGCGATCTGCAGCGCCGCCGCGGCCTCGCCTTT
TTGTTCATCAGCCATGATCTGCGCGTCGTGCGCGCGCTGGCGAGCGAAATCATCGTCATGCGCGGCGGCAAGCTGATCGA
ATCGGGTCCCGCCGCCGAACTGCTGGCGCATCCAAAGAGCGACTATACCCGCGCTCTGTTCGCCGCCGCTTTCGACATGC
GGGCGGAAGAGGGGTCCGTGATTCCCGTTTAG

Protein sequence :
MIPAAAPLLDIRDLSVSFRAGAARTRAVDGVSFALESGRTLALVGESGSGKSVTALSILRLLAPGAETQGNALFDGEDLL
AASEERLRAIRGARITMVFQEPMTSLNPLHSIEKQIGEILELHGARGAEKIRARVVELLGEVGIPDPADRLAAYPHQLSG
GQRQRVMIAMALANRPDLFIADEPTTALDVTVQAQILDLLKRLQARHGMAMLFITHDLNIVRKIADDVAVMQKGRIVETG
PVATIFSAPRHPYTCALLAAEPKGAPPPFNAAAQPIVSADNIKVWFPIKRGFFRRTIGYVKAVDGVSVTVREGETVGVVG
ESGSGKTTLGLALLRLIRSEGAIVFLGQRIDGLRFKELRPIRRDMQIVFQDPYGSLSPRLPVADIVAEGLGVQDKSLSYS
QKREIVARALADTGLDPAAMDRYPHEFSGGQRQRIAIARAMVLEPKFIVLDEPTSALDMSVQAQIVDLLRDLQRRRGLAF
LFISHDLRVVRALASEIIVMRGGKLIESGPAAELLAHPKSDYTRALFAAAFDMRAEEGSVIPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-83 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-78 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-78 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-78 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-78 42